RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CSN1S1P47710 185 aa14.45□□□□□ -0.1
SS18-224ENST00000584083 TMEM88Q6PEY1 159 aa14.45□□□□□ -0.1
SS18-224ENST00000584083 C9orf47Q6ZRZ4 202 aa14.45□□□□□ -0.1
SS18-224ENST00000584083 ZNF503Q96F45 646 aa14.45□□□□□ -0.1
SS18-224ENST00000584083 EIF3GO75821 320 aaKnown RBP eCLIP14.44□□□□□ -0.1
SS18-224ENST00000584083 GIPP09681 153 aaPredicted RBP14.44□□□□□ -0.1
SS18-224ENST00000584083 M6PRP20645 277 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 RNASE4P34096 147 aaKnown RBP14.44□□□□□ -0.1
SS18-224ENST00000584083 ZNF266Q14584 549 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 RGS21Q2M5E4 152 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 AQP10Q96PS8 301 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 VGLL1Q99990 258 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 PYGO2Q9BRQ0 406 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 KMT2AQ03164 3969 aa14.44□□□□□ -0.1
SS18-224ENST00000584083 CBY3A6NI87 242 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 F5H768 121 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 ATP5G1P05496 136 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 GPX1P07203 203 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 ATP5G3P48201 142 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 CD300CQ08708 224 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 Q5BKY6 102 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 LYPD1Q8N2G4 141 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 POM121L12Q8N7R1 296 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 ASB13Q8WXK3 278 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 Q9H3A6 140 aa14.43□□□□□ -0.1
SS18-224ENST00000584083 EPPK1P58107 5090 aaKnown RBP14.43□□□□□ -0.1
SS18-224ENST00000584083 SNURFLB1AK76 121 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 KLLNB2CW77 178 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 RAB2AP61019 212 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 BTN1A1Q13410 526 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 UBE2DNLQ8IWF7 75 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 HSD17B11Q8NBQ5 300 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 OR10G4Q8NGN3 311 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 OR10G9Q8NGN4 311 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 OR10G7Q8NGN6 311 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 FAM19A4Q96LR4 140 aa14.42□□□□□ -0.1
SS18-224ENST00000584083 CRISP2P16562 243 aa14.41□□□□□ -0.1
SS18-224ENST00000584083 ZNF138P52744 262 aa14.41□□□□□ -0.1
SS18-224ENST00000584083 INO80EQ8NBZ0 244 aaPredicted RBP14.41□□□□□ -0.1
SS18-224ENST00000584083 ZNF492Q9P255 531 aa14.41□□□□□ -0.1
SS18-224ENST00000584083 HMGB3O15347 200 aaKnown RBP14.4□□□□□ -0.1
SS18-224ENST00000584083 NMBP08949 121 aa14.4□□□□□ -0.1
SS18-224ENST00000584083 PQLC2Q6ZP29 291 aa14.4□□□□□ -0.1
SS18-224ENST00000584083 HYLS1Q96M11 299 aa14.4□□□□□ -0.1
SS18-224ENST00000584083 FXYD6-FXYD2A0A087WZ82 144 aa14.39□□□□□ -0.11
SS18-224ENST00000584083 ZNF324O75467 553 aaPredicted RBP14.39□□□□□ -0.11
SS18-224ENST00000584083 ZFAND2AQ8N6M9 145 aa14.39□□□□□ -0.11
SS18-224ENST00000584083 C15orf53Q8NAA6 179 aa14.39□□□□□ -0.11
SS18-224ENST00000584083 Q8TAT8 98 aa14.39□□□□□ -0.11
SS18-224ENST00000584083 GAGE12BA1L429 117 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 GAGE7O76087 117 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 GAGE12FP0CL80 117 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 GAGE12GP0CL81 117 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 GAGE12IP0CL82 117 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 EIF4E3Q8N5X7 224 aaKnown RBP14.38□□□□□ -0.11
SS18-224ENST00000584083 OR2T35Q8NGX2 323 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 CMTM2Q8TAZ6 248 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 RXFP4Q8TDU9 374 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 OTORQ9NRC9 128 aa14.38□□□□□ -0.11
SS18-224ENST00000584083 RBAKDNA6NC62 111 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 PGPA6NDG6 321 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 ATP6V0CP27449 155 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 CDC34P49427 236 aaPredicted RBP14.37□□□□□ -0.11
SS18-224ENST00000584083 FAM74A1Q5RGS3 127 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 PRR9Q5T870 116 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 ZNF680Q8NEM1 530 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 OR2G3Q8NGZ4 309 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 PSMG3Q9BT73 122 aaPredicted RBP14.37□□□□□ -0.11
SS18-224ENST00000584083 RPH3ALQ9UNE2 315 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 DNAH6Q9C0G6 4158 aa14.37□□□□□ -0.11
SS18-224ENST00000584083 DIRC3C9JPN6 131 aa14.36□□□□□ -0.11
SS18-224ENST00000584083 RGS13O14921 159 aa14.36□□□□□ -0.11
SS18-224ENST00000584083 LINC00467Q9BRT7 94 aa14.36□□□□□ -0.11
SS18-224ENST00000584083 GSN-AS1Q9NRJ2 163 aa14.36□□□□□ -0.11
SS18-224ENST00000584083 BORCS7-ASMTA0A0B4J1R7 106 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 TRBV7-9A0A0J9YWB2 115 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 NUDT3O95989 172 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 MBP02144 154 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 ARL14EPLP0DKL9 152 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 SERF2P84101 59 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 DAZ2Q13117 558 aaKnown RBP14.35□□□□□ -0.11
SS18-224ENST00000584083 RNF212Q495C1 297 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 LINC00612Q8N6U2 182 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 SH3BGRL3Q9H299 93 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
SS18-224ENST00000584083 RNF222A6NCQ9 220 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 M0R2N4 97 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 OR5I1Q13606 314 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 ANXA2RQ3ZCQ2 193 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 RAB24Q969Q5 203 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 ATG101Q9BSB4 218 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 NACAE9PAV3 2078 aa14.34□□□□□ -0.11
SS18-224ENST00000584083 IGHV1OR15-1A0A075B7D0 117 aa14.33□□□□□ -0.12
SS18-224ENST00000584083 RPL7L1Q6DKI1 246 aaKnown RBP14.33□□□□□ -0.12
SS18-224ENST00000584083 Q6ZQT7 251 aa14.33□□□□□ -0.12
SS18-224ENST00000584083 Q6ZTI0 123 aa14.33□□□□□ -0.12
SS18-224ENST00000584083 C11orf72Q8NBR9 251 aa14.33□□□□□ -0.12
SS18-224ENST00000584083 GNPNAT1Q96EK6 184 aaPredicted RBP14.33□□□□□ -0.12
SS18-224ENST00000584083 IGLV2-18A0A075B6J9 118 aa14.32□□□□□ -0.12
SS18-224ENST00000584083 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms