RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 POLR2HP52434 150 aaKnown RBP0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 MAXP61244 160 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 B2MP61769 119 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 DR1Q01658 176 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 LINC00575Q6W349 94 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 DIRC1Q969H9 104 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 ZC2HC1AQ96GY0 325 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 CARD19Q96LW7 228 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 BOKQ9UMX3 212 aaPredicted RBP0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 EML5Q05BV3 1969 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 DLC1Q96QB1 1528 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 TRAV23DV6A0A075B6W5 121 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 TRBV7-6A0A0J9YX20 115 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 LOC107986453A0A1B0GWG9 222 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 A0A1W2PPM0 123 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 SULT1C4O75897 302 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 IGHV3-33P01772 117 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 MIR22HGQ0VDD5 57 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 GLIPR1L1Q6UWM5 242 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 FOXI2Q6ZQN5 318 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 CCL4L1Q8NHW4 92 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 MRPL40Q9NQ50 206 aaKnown RBP0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 SPANXCQ9NY87 97 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 TRAPPC2LQ9UL33 140 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 A2MP01023 1474 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 BCL9O00512 1426 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 ERBINQ96RT1 1412 aa0.71□□□□□ -2.3
PPP4R1-227ENST00000583988 TCOF1Q13428 1488 aaKnown RBP0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 C3orf85A0A1B0GTC6 90 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 PRORSD1PA6NEY8 169 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 BBIP1A8MTZ0 92 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 H3BMG7 143 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 NEDD8Q15843 81 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 HRCT1Q6UXD1 115 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 TEX29Q8N6K0 151 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 C5orf17Q8NAS9 161 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 CLEC2BQ92478 149 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 CCDC115Q96NT0 180 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 CIB3Q96Q77 187 aaPredicted RBP0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 GINS2Q9Y248 185 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 NDUFAF1Q9Y375 327 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 ZFC3H1O60293 1989 aaKnown RBP0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 ZGRF1Q86YA3 2104 aa0.7□□□□□ -2.3
PPP4R1-227ENST00000583988 COL1A1P02452 1464 aaPredicted RBP0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 J3KT08 172 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 CRYGSP22914 178 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 ETV6P41212 452 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 EFNA4P52798 201 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 DNAJB13P59910 316 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 CCSMST1Q4G0I0 132 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 TAC4Q86UU9 113 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 LINC00269Q8N2A0 174 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 MORN4Q8NDC4 146 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 UNC13AQ9UPW8 1703 aa0.69□□□□□ -2.3
PPP4R1-227ENST00000583988 LOC107984640A0A0U1RRK4 108 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 IFITM5A6NNB3 132 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 RPL7P18124 248 aaKnown RBP0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 RPL22P35268 128 aaKnown RBP0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 RPS28P62857 69 aaKnown RBP0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 PSPHP78330 225 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 C3orf62Q6ZUJ4 267 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 OR8I2Q8N0Y5 310 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 TMEM229BQ8NBD8 167 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 OR5A2Q8NGI9 324 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 PYDC1Q8WXC3 89 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 AIF1LQ9BQI0 150 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 TAF9BQ9HBM6 251 aa0.68□□□□□ -2.3
PPP4R1-227ENST00000583988 TANC2Q9HCD6 1990 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 LOC107984156A0A0G2JMH3 177 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 A0A0J9YY99 117 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 PNMA8CA0A1B0GUJ8 204 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 DPM2O94777 84 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 OCIAD2Q56VL3 154 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 IZUMO2Q6UXV1 221 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 ZCCHC23Q6ZST2 131 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 AKAP14Q86UN6 197 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 ARL17AQ8IVW1 177 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 Q8N6K4 173 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 TCTEX1D1Q8N7M0 179 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 OR51A4Q8NGJ6 313 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 BRK1Q8WUW1 75 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 NAT14Q8WUY8 206 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 SMIM7Q9BQ49 75 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 CBLN4Q9NTU7 201 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 MPC1Q9Y5U8 109 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 PTPRDP23468 1912 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 MUC4Q99102 2169 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 FANCMQ8IYD8 2048 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 FER1L6Q2WGJ9 1857 aa0.67□□□□□ -2.3
PPP4R1-227ENST00000583988 OVOS2A0A0G2JMS6 1433 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 BORCS7-ASMTA0A0B4J1R7 106 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 A0A1W2PPB8 328 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 A0A1W2PRS3 328 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 KIR3DP1A8MWS1 328 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 M0QZK8 103 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 UQCRQO14949 82 aa0.66□□□□□ -2.3
PPP4R1-227ENST00000583988 EDF1O60869 148 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms