RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 LINC00052Q96N35 136 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 RARRES2Q99969 163 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 ATG101Q9BSB4 218 aa8.22□□□□□ -1.09
CDK5RAP3-204ENST00000577664 PRAC2D3DTV9 90 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 DUSP14O95147 198 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 S100A9P06702 114 aaKnown RBP8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 HLA-DRB4P13762 266 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ATP5G3P48201 142 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 CST9LP1Q5W188 147 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 C2CD4CQ8TF44 421 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 CITED4Q96RK1 184 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 LENEPQ9Y5L5 61 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 HLA-DRB4X5D2U9 266 aa8.21□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 IGLV2-11P01706 119 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 PEA15Q15121 130 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 HAGHQ16775 308 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 EBLN2Q6P2I7 272 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 UQCC3Q6UW78 93 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 COX8CQ7Z4L0 72 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 CYB561D1Q8N8Q1 229 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TMEM75Q8N9X5 138 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZNF738Q8NE65 137 aa8.2□□□□□ -1.1
CDK5RAP3-204ENST00000577664 K7EQM0 130 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 PEX7O00628 323 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TAS2R60P59551 318 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TMEM183BQ1AE95 376 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 GDF5OSQ5U4N7 250 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 AMTNQ6UX39 209 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TRPT1Q86TN4 253 aaKnown RBP8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 APRG1Q8IVJ8 170 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 OR10J6PQ8NGY7 276 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 EIF5A2Q9GZV4 153 aaKnown RBP8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 AGPAT4-IT1Q9H0P7 198 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZNF492Q9P255 531 aa8.19□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KIR2DL5BA0A0G2JN68 375 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KIR2DL5BA0A0G2JPC4 375 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 F6UB75 175 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 CRISP2P16562 243 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 CNN1P51911 297 aaKnown RBP8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZNF124Q15973 351 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KIR2DL5AQ8N109 375 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SMIM12Q96EX1 92 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 FMC1Q96HJ9 113 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 PRR25Q96S07 402 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 VGLL1Q99990 258 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
CDK5RAP3-204ENST00000577664 C9JQL5 133 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 CT45A10P0DMU9 189 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZNF138P52744 262 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 DEFB1P60022 68 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 GNG5P63218 68 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SRSF3P84103 164 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ACTL10Q5JWF8 245 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 MORN3Q6PF18 240 aaPredicted RBP8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 STHQ8IWL8 128 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 MLST8Q9BVC4 326 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
CDK5RAP3-204ENST00000577664 IGKV2-40A0A087WW87 121 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SCO2A0A1W2PP80 73 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KNCNA6PVL3 124 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 LTAP01374 205 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 IGKV2D-40P01614 121 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 FLI1Q01543 452 aaPredicted RBP8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SAPCD1Q5SSQ6 148 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TMEM78Q5T7P6 136 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 TVP23CQ96ET8 276 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 WFDC10AQ9H1F0 79 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 PSG8Q9UQ74 426 aa8.16□□□□□ -1.1
CDK5RAP3-204ENST00000577664 AGRNO00468 2067 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 KLLNB2CW77 178 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 C9JCJ5 164 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 AMBPP02760 352 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 GIG44P09565 113 aaPredicted RBP8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZNF705DP0CH99 300 aaPredicted RBP8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ZNF705BP0CI00 300 aaPredicted RBP8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 RPL35P42766 123 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 NUTF2P61970 127 aaKnown RBP8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 HIST1H1AQ02539 215 aaPredicted RBP8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 ERCC8Q13216 396 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 SRD5A3Q9H8P0 318 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 LY96Q9Y6Y9 160 aa8.15□□□□□ -1.1
CDK5RAP3-204ENST00000577664 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
CDK5RAP3-204ENST00000577664 TRAV8-1A0A0A6YYK1 113 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms