RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 NDUFAF3Q9BU61 184 aa14.96□□□□□ -0.01
CDH5-204ENST00000563425 TPPP3Q9BW30 176 aa14.96□□□□□ -0.01
CDH5-204ENST00000563425 IGLV1-40P01703 118 aa14.96□□□□□ -0.02
CDH5-204ENST00000563425 C3orf79P0CE67 100 aa14.96□□□□□ -0.02
CDH5-204ENST00000563425 SRSF2Q01130 221 aaKnown RBP14.96□□□□□ -0.02
CDH5-204ENST00000563425 LYZL1Q6UWQ5 148 aa14.96□□□□□ -0.02
CDH5-204ENST00000563425 GLMPQ8WWB7 406 aa14.96□□□□□ -0.02
CDH5-204ENST00000563425 KLK15Q9H2R5 256 aa14.96□□□□□ -0.02
CDH5-204ENST00000563425 LRRK2Q5S007 2527 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 A1L4Q6 167 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 J3QLI3 93 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 M0R2Z0 102 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 PF4V1P10720 104 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 TDRG1Q3Y452 100 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 ZNF493Q6ZR52 646 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 CR1P17927 2039 aa14.95□□□□□ -0.02
CDH5-204ENST00000563425 UNQ9165/PRO28630Q6UXU0 137 aa14.94□□□□□ -0.02
CDH5-204ENST00000563425 CHCHD1Q96BP2 118 aaKnown RBP14.94□□□□□ -0.02
CDH5-204ENST00000563425 CFHR3Q02985 330 aa14.94□□□□□ -0.02
CDH5-204ENST00000563425 ZNF580Q9UK33 172 aa14.94□□□□□ -0.02
CDH5-204ENST00000563425 FBN2P35556 2912 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 FAM181BA6NEQ2 426 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 FABP5P3A8MUU1 101 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 CTRLP40313 264 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 DEFB112Q30KQ8 113 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 ZNF575Q86XF7 245 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 C20orf144Q9BQM9 153 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 AGPAT4-IT1Q9H0P7 198 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 CLEC5AQ9NY25 188 aa14.93□□□□□ -0.02
CDH5-204ENST00000563425 M0QZ24 198 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 IGHV3-11P01762 117 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 DMRTA1Q5VZB9 504 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 OR4X2Q8NGF9 303 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 PSMG3-AS1Q96PY0 264 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 VAMP8Q9BV40 100 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 A0A0G2JLM5 398 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 IGLC6P0CF74 106 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 IL17RELQ6ZVW7 336 aa14.92□□□□□ -0.02
CDH5-204ENST00000563425 SMAD7O15105 426 aaKnown RBP14.91□□□□□ -0.02
CDH5-204ENST00000563425 TGFAP01135 160 aa14.91□□□□□ -0.02
CDH5-204ENST00000563425 IGHV4-59P01825 116 aa14.91□□□□□ -0.02
CDH5-204ENST00000563425 LINC00614P0C842 121 aa14.91□□□□□ -0.02
CDH5-204ENST00000563425 FER1L6-AS1Q8NA97 138 aa14.91□□□□□ -0.02
CDH5-204ENST00000563425 TMEM213A2RRL7 107 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 LOXL1Q08397 574 aaPredicted RBP14.9□□□□□ -0.02
CDH5-204ENST00000563425 C9orf47Q6ZRZ4 202 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 USP9YO00507 2555 aaPredicted RBP14.9□□□□□ -0.02
CDH5-204ENST00000563425 ORM1P02763 201 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 ZNF138P52744 262 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 LINC01559Q495D7 138 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 TMEM78Q5T7P6 136 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 EBLN2Q6P2I7 272 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 LCNL1Q6ZST4 164 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 C9orf139Q6ZV77 190 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 MAPK1IP1LQ8NDC0 245 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 C16orf92Q96LL3 132 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 PAM16Q9Y3D7 125 aa14.9□□□□□ -0.02
CDH5-204ENST00000563425 IGHV1-24A0A0C4DH33 117 aa14.89□□□□□ -0.03
CDH5-204ENST00000563425 C2orf70A6NJV1 201 aa14.89□□□□□ -0.03
CDH5-204ENST00000563425 NPFFR1Q9GZQ6 430 aa14.89□□□□□ -0.03
CDH5-204ENST00000563425 PPP1R14DQ9NXH3 145 aa14.89□□□□□ -0.03
CDH5-204ENST00000563425 POLQO75417 2590 aa14.89□□□□□ -0.03
CDH5-204ENST00000563425 CYB5R2Q6BCY4 276 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 GPHB5Q86YW7 130 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 RNF223E7ERA6 249 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 BTF3P20290 206 aaKnown RBP14.88□□□□□ -0.03
CDH5-204ENST00000563425 KRTAP10-9P60411 292 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 HIST1H1AQ02539 215 aaPredicted RBP14.88□□□□□ -0.03
CDH5-204ENST00000563425 PMCHL1Q16048 86 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 FAM104BQ5XKR9 115 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 CENPEQ02224 2701 aa14.88□□□□□ -0.03
CDH5-204ENST00000563425 RAB4AP20338 218 aa14.87□□□□□ -0.03
CDH5-204ENST00000563425 TMEM95Q3KNT9 176 aa14.87□□□□□ -0.03
CDH5-204ENST00000563425 C20orf173Q96LM9 149 aa14.87□□□□□ -0.03
CDH5-204ENST00000563425 U3KQK5 164 aa14.87□□□□□ -0.03
CDH5-204ENST00000563425 MUC21A0A0G2JKD1 596 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 MUC21A0A140T8X8 626 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 FSHBP01225 129 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 SSTP61278 116 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 MUC21Q5SSG8 566 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 CNFNQ9BYD5 112 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 BEX4Q9NWD9 120 aaPredicted RBP14.86□□□□□ -0.03
CDH5-204ENST00000563425 SOCS3O14543 225 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 CSMD2Q7Z408 3487 aa14.86□□□□□ -0.03
CDH5-204ENST00000563425 IGHV4-31P0DP07 118 aa14.85□□□□□ -0.03
CDH5-204ENST00000563425 PSMB8P28062 276 aa14.85□□□□□ -0.03
CDH5-204ENST00000563425 TWIST1Q15672 202 aa14.85□□□□□ -0.03
CDH5-204ENST00000563425 AMN1Q8IY45 258 aa14.85□□□□□ -0.03
CDH5-204ENST00000563425 MIEN1Q9BRT3 115 aa14.85□□□□□ -0.03
CDH5-204ENST00000563425 PTPN13Q12923 2485 aa14.85□□□□□ -0.03
CDH5-204ENST00000563425 PRRC2AP48634 2157 aaKnown RBP14.84□□□□□ -0.03
CDH5-204ENST00000563425 CSN3P07498 182 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 OR5AL1P0C617 328 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 ZNF738Q8NE65 137 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 PEF1Q9UBV8 284 aaKnown RBP14.84□□□□□ -0.03
CDH5-204ENST00000563425 ZANQ9Y493 2812 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 IGHV7-4-1A0A0J9YVY3 117 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 D6R8Y8 96 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 DEFB113Q30KQ7 82 aa14.84□□□□□ -0.03
CDH5-204ENST00000563425 LBHQ53QV2 105 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms