RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 PEMTQ9UBM1 199 aa17.04■□□□□ 0.32
PBX1-218ENST00000560469 OVOL1O14753 267 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 ID1P41134 155 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 ERCC8Q13216 396 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 TMEM78Q5T7P6 136 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 C9orf47Q6ZRZ4 202 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 C20orf173Q96LM9 149 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 ASCL2Q99929 193 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 NAT8BQ9UHF3 227 aa17.03■□□□□ 0.32
PBX1-218ENST00000560469 IZUMO1RA6ND01 250 aa17.02■□□□□ 0.32
PBX1-218ENST00000560469 TCF21O43680 179 aa17.02■□□□□ 0.32
PBX1-218ENST00000560469 CD28P10747 220 aa17.02■□□□□ 0.32
PBX1-218ENST00000560469 TCL1AP56279 114 aa17.02■□□□□ 0.32
PBX1-218ENST00000560469 Q8TAT8 98 aa17.02■□□□□ 0.32
PBX1-218ENST00000560469 PPP1R14DQ9NXH3 145 aa17.02■□□□□ 0.32
PBX1-218ENST00000560469 IGKV3-7A0A075B6H7 116 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 SMUG1Q53HV7 270 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 GFRA4Q9GZZ7 299 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 AGPAT4-IT1Q9H0P7 198 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 TSSC4Q9Y5U2 329 aaPredicted RBP17.01■□□□□ 0.31
PBX1-218ENST00000560469 FAM231BA6NCW3 169 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 CRIP1P50238 77 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 ZNF138P52744 262 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 COX19Q49B96 90 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 FAM162BQ5T6X4 162 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 DCANP1Q8TF63 244 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 RNF114Q9Y508 228 aa17.01■□□□□ 0.31
PBX1-218ENST00000560469 PHOX2AO14813 284 aa17■□□□□ 0.31
PBX1-218ENST00000560469 S100A6P06703 90 aa17■□□□□ 0.31
PBX1-218ENST00000560469 ACTL10Q5JWF8 245 aa17■□□□□ 0.31
PBX1-218ENST00000560469 OR2D3Q8NGH3 330 aa17■□□□□ 0.31
PBX1-218ENST00000560469 NEU1Q99519 415 aa17■□□□□ 0.31
PBX1-218ENST00000560469 HAX1O00165 279 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 OR9G4Q8NGQ1 327 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 OR10J6PQ8NGY7 276 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 LINC00477Q96M19 166 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 GPR61Q9BZJ8 451 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 MS4A6AQ9H2W1 248 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 MTORP42345 2549 aa16.99■□□□□ 0.31
PBX1-218ENST00000560469 NUP35Q8NFH5 326 aa16.98■□□□□ 0.31
PBX1-218ENST00000560469 FRZBQ92765 325 aa16.98■□□□□ 0.31
PBX1-218ENST00000560469 DUX3Q96PT4 197 aa16.98■□□□□ 0.31
PBX1-218ENST00000560469 CITED2Q99967 270 aaPredicted RBP16.98■□□□□ 0.31
PBX1-218ENST00000560469 LENEPQ9Y5L5 61 aa16.98■□□□□ 0.31
PBX1-218ENST00000560469 TRAPPC1Q9Y5R8 145 aa16.98■□□□□ 0.31
PBX1-218ENST00000560469 HIGD1CA8MV81 97 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 SH2D1AO60880 128 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 CRLF1O75462 422 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 C11orf44Q8N8P7 122 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 DLX4Q92988 240 aaPredicted RBP16.97■□□□□ 0.31
PBX1-218ENST00000560469 TRGC1P0CF51 173 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 PROK1P58294 105 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 FHL3Q13643 280 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 WDR73Q6P4I2 378 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 RASL11AQ6T310 242 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 RAX2Q96IS3 184 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 SELENOKQ9Y6D0 94 aa16.97■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BKO60814 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BJP06899 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BOP23527 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BBP33778 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BDP58876 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BCP62807 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 FABP9Q0Z7S8 132 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST2H2BEQ16778 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.96■□□□□ 0.31
PBX1-218ENST00000560469 ADAMTSL5Q6ZMM2 481 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 WFDC3Q8IUB2 231 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BHQ93079 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BNQ99877 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 HIST1H2BMQ99879 126 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 GNB1LQ9BYB4 327 aa16.96■□□□□ 0.31
PBX1-218ENST00000560469 SPINK4O60575 86 aa16.95■□□□□ 0.3
PBX1-218ENST00000560469 PAFAH1B2P68402 229 aa16.95■□□□□ 0.3
PBX1-218ENST00000560469 OR8A1Q8NGG7 326 aa16.95■□□□□ 0.3
PBX1-218ENST00000560469 SAV1Q9H4B6 383 aaPredicted RBP16.95■□□□□ 0.3
PBX1-218ENST00000560469 CUBNO60494 3623 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 A0A1W2PRX2 142 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 XKRY2A2RUG3 117 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 FABP5P3A8MUU1 101 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 K7EQG2 157 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 CCL24O00175 119 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 MT-ND6P03923 174 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 SNRPD3P62318 126 aaKnown RBP16.94■□□□□ 0.3
PBX1-218ENST00000560469 SRSF2Q01130 221 aaKnown RBP16.94■□□□□ 0.3
PBX1-218ENST00000560469 RBPMS2Q6ZRY4 209 aaKnown RBP16.94■□□□□ 0.3
PBX1-218ENST00000560469 ATP5L2Q7Z4Y8 100 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 GTSF1Q8WW33 167 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 TMEM189A5PLL7 270 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 ZNF80P51504 273 aaPredicted RBP16.94■□□□□ 0.3
PBX1-218ENST00000560469 FOXA3P55318 350 aaPredicted RBP16.94■□□□□ 0.3
PBX1-218ENST00000560469 HIST2H2BDQ6DRA6 164 aa16.94■□□□□ 0.3
PBX1-218ENST00000560469 MRPL54Q6P161 138 aaKnown RBP16.94■□□□□ 0.3
PBX1-218ENST00000560469 CSN3P07498 182 aa16.93■□□□□ 0.3
PBX1-218ENST00000560469 RPS20P60866 119 aaKnown RBP16.93■□□□□ 0.3
PBX1-218ENST00000560469 C5orf52A6NGY3 159 aa16.92■□□□□ 0.3
PBX1-218ENST00000560469 SNURFLB1AK76 121 aa16.92■□□□□ 0.3
PBX1-218ENST00000560469 TFPI2P48307 235 aa16.92■□□□□ 0.3
PBX1-218ENST00000560469 SNRPEP62304 92 aaKnown RBP16.92■□□□□ 0.3
PBX1-218ENST00000560469 Q6AWC8 147 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms