RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 K7EN84 100 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 SAP30O75446 220 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 GCGP01275 180 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 IGKV2D-40P01614 121 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-209ENST00000560463 IGLV1-51P01701 117 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 CMC4P56277 68 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-209ENST00000560463 CD300EQ496F6 205 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-209ENST00000560463 ATRAIDQ6UW56 229 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 FAM231DQ6ZW35 169 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 COX8CQ7Z4L0 72 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 PRNTQ86SH4 94 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 WFDC3Q8IUB2 231 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 C3orf56Q8N813 242 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 C20orf173Q96LM9 149 aa6.46□□□□□ -1.38
TRAF3-209ENST00000560463 FBN1P35555 2871 aaKnown RBP6.46□□□□□ -1.38
TRAF3-209ENST00000560463 TRAV8-1A0A0A6YYK1 113 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 PRAC2D3DTV9 90 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF138P52744 262 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 RNF212Q495C1 297 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 IBA57Q5T440 356 aaKnown RBP6.45□□□□□ -1.38
TRAF3-209ENST00000560463 SHISA2Q6UWI4 295 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 C12orf54Q6X4T0 127 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 C15orf54Q8N8G6 183 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 OR8A1Q8NGG7 326 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 SGK494Q96LW2 274 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 PRR25Q96S07 402 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 VGLL1Q99990 258 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 MCRIP2Q9BUT9 160 aaKnown RBP6.45□□□□□ -1.38
TRAF3-209ENST00000560463 AGPAT4-IT1Q9H0P7 198 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 TUBA4BQ9H853 241 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 OSTCQ9NRP0 149 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF492Q9P255 531 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 CMYA5Q8N3K9 4069 aa6.45□□□□□ -1.38
TRAF3-209ENST00000560463 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF688P0C7X2 276 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 CT45A10P0DMU9 189 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 TFPI2P48307 235 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 ERVFC1-1P60608 527 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 SMUG1Q53HV7 270 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 PSMG4Q5JS54 123 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 C9orf66Q5T8R8 295 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 EBLN2Q6P2I7 272 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 WFDC9Q8NEX5 89 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 OR10G8Q8NGN5 311 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 IMMP2LQ96T52 175 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 FAM110AQ9BQ89 295 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 SMCO4Q9NRQ5 59 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 AURKAIP1Q9NWT8 199 aaPredicted RBP6.44□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF256Q9Y2P7 627 aaPredicted RBP6.44□□□□□ -1.38
TRAF3-209ENST00000560463 NOTCH3Q9UM47 2321 aa6.44□□□□□ -1.38
TRAF3-209ENST00000560463 A0A0J9YX75 114 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 H7BYZ3 331 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 CD33P20138 364 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 OR5I1Q13606 314 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 FOXI2Q6ZQN5 318 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 NHLRC2Q8NBF2 726 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 OR4B1Q8NGF8 309 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 DAZAP1Q96EP5 407 aaKnown RBP6.43□□□□□ -1.38
TRAF3-209ENST00000560463 ODF3Q96PU9 254 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 ASCL2Q99929 193 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 SAV1Q9H4B6 383 aaPredicted RBP6.43□□□□□ -1.38
TRAF3-209ENST00000560463 SELENOKQ9Y6D0 94 aa6.43□□□□□ -1.38
TRAF3-209ENST00000560463 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 C19orf71A6NCJ1 209 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 IZUMO1RA6ND01 250 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 GATCO43716 136 aaKnown RBP6.42□□□□□ -1.38
TRAF3-209ENST00000560463 SCO1O75880 301 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 CRISP2P16562 243 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 S100PP25815 95 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 HIST1H1AQ02539 215 aaPredicted RBP6.42□□□□□ -1.38
TRAF3-209ENST00000560463 ERCC8Q13216 396 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 BTN1A1Q13410 526 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 CT83Q5H943 113 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 FAM162BQ5T6X4 162 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 PRR27Q6MZM9 219 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 NUDT10Q8NFP7 164 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 NUDT11Q96G61 164 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 ZC2HC1AQ96GY0 325 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 BTF3L4Q96K17 158 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 RNASE7Q9H1E1 156 aaKnown RBP6.42□□□□□ -1.38
TRAF3-209ENST00000560463 MAP6D1Q9H9H5 199 aa6.42□□□□□ -1.38
TRAF3-209ENST00000560463 TRAV9-1A0A075B6T8 112 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 FAM231BA6NCW3 169 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 A8MTW9 85 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 FABP5P3A8MUU1 101 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF705GA8MUZ8 300 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-209ENST00000560463 OR11H12B2RN74 326 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 F6UB75 175 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 WIPF1O43516 503 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 P01737 135 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 HLA-DRB4P13762 266 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 LEPP41159 167 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 DEFB131AP59861 70 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 BEAN1Q3B7T3 259 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 TMEM88Q6PEY1 159 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms