RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 NHLH2Q02577 135 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 CD300CQ08708 224 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 ICAM4Q14773 271 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 LRRC37A5PQ49AS3 106 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 AAMDCQ9H7C9 122 aa10.8□□□□□ -0.68
TPM1-211ENST00000558314 MUC4Q99102 2169 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 ZNF253O75346 499 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 NDUFB4O95168 129 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 IGHV3-53P01767 116 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 GPX1P07203 203 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 ESRGQ1W209 222 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 MIR17HGQ75NE6 70 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 ODF3Q96PU9 254 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 NPCDR1Q9BY65 106 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 AGPAT4-IT1Q9H0P7 198 aa10.79□□□□□ -0.68
TPM1-211ENST00000558314 RGS13O14921 159 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 ZNF680Q8NEM1 530 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 OR5C1Q8NGR4 320 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 ENKURQ8TC29 256 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
TPM1-211ENST00000558314 LINC00477Q96M19 166 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 SLC25A2Q9BXI2 301 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 TMEM14CQ9P0S9 112 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 FUT9Q9Y231 359 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 PRELID1Q9Y255 219 aa10.78□□□□□ -0.68
TPM1-211ENST00000558314 OR10J4P0C629 311 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
TPM1-211ENST00000558314 IL15RAQ13261 267 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 TTC32Q5I0X7 151 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 SPATA12Q7Z6I5 190 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 EIF4E3Q8N5X7 224 aaKnown RBP10.77□□□□□ -0.69
TPM1-211ENST00000558314 VGLL1Q99990 258 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 KRTAP1-5Q9BYS1 174 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.69
TPM1-211ENST00000558314 MPDU1O75352 247 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 Q6ZQT7 251 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 ARPC5LQ9BPX5 153 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 SLC25A31Q9H0C2 315 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 OR51M1Q9H341 326 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 MRPL16Q9NX20 251 aaKnown RBP10.76□□□□□ -0.69
TPM1-211ENST00000558314 OR5AC2Q9NZP5 309 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 TP53TG3Q9ULZ0 132 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 RYR1P21817 5038 aa10.76□□□□□ -0.69
TPM1-211ENST00000558314 NBEAP1P0C6P0 100 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 PDE6HQ13956 83 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 PRR9Q5T870 116 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 C11orf72Q8NBR9 251 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 Q8TAT8 98 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 PAXXQ9BUH6 204 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 KRTAP4-5Q9BYR2 181 aa10.75□□□□□ -0.69
TPM1-211ENST00000558314 MRPS16Q9Y3D3 137 aaKnown RBP10.75□□□□□ -0.69
TPM1-211ENST00000558314 A0A096LPF7 62 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 KLLNB2CW77 178 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 E5RGE8 158 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 OR7C2O60412 319 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 ZNF324O75467 553 aaPredicted RBP10.74□□□□□ -0.69
TPM1-211ENST00000558314 ASAH1Q13510 395 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 MAPKAPK5-AS1Q8N8E1 139 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 CHAC2Q8WUX2 184 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
TPM1-211ENST00000558314 IGHV1OR15-1A0A075B7D0 117 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 PAX4O43316 350 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 PHYHIPLQ96FC7 376 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 FAM167A-AS1Q96KT0 104 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 FAM19A4Q96LR4 140 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 Q9H3A6 140 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 ABCA13Q86UQ4 5058 aa10.73□□□□□ -0.69
TPM1-211ENST00000558314 C17orf112F2Z3M2 114 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 H3BNG1 76 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 UPK1BO75841 260 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 CSN1S1P47710 185 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 TCL1AP56279 114 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 DEFA1P59665 94 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 DEFA3P59666 94 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
TPM1-211ENST00000558314 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 UPK3BQ9BT76 320 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 SMIM3Q9BZL3 60 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 WDR61Q9GZS3 305 aaKnown RBP10.72□□□□□ -0.69
TPM1-211ENST00000558314 KCNIP2Q9NS61 270 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 RPH3ALQ9UNE2 315 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 ICOSQ9Y6W8 199 aa10.72□□□□□ -0.69
TPM1-211ENST00000558314 H0YIZ8 118 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 SPINK4O60575 86 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
TPM1-211ENST00000558314 CRISP2P16562 243 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 ZNF138P52744 262 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 UBE2L3P68036 154 aaKnown RBP10.71□□□□□ -0.69
TPM1-211ENST00000558314 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 HYLS1Q96M11 299 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 C8orf49Q96NF6 230 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 MRPL32Q9BYC8 188 aaKnown RBP10.71□□□□□ -0.69
TPM1-211ENST00000558314 NMES1Q9C002 83 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms