RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 FAM74A1Q5RGS3 127 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 IGFL4Q6B9Z1 124 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 MORN3Q6PF18 240 aaPredicted RBP5.58□□□□□ -1.52
ABCD4-220ENST00000553998 RNF182Q8N6D2 247 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 OR8A1Q8NGG7 326 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 FAM213BQ8TBF2 198 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 RXFP4Q8TDU9 374 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 RPUSD4Q96CM3 377 aaKnown RBP5.58□□□□□ -1.52
ABCD4-220ENST00000553998 MAP1LC3BQ9GZQ8 125 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 OTORQ9NRC9 128 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 ARL2-SNX15V9GYD0 113 aa5.58□□□□□ -1.52
ABCD4-220ENST00000553998 A0A1W2PRE2 83 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 TEX46H3BTG2 121 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 EIF3GO75821 320 aaKnown RBP eCLIP5.57□□□□□ -1.52
ABCD4-220ENST00000553998 HBE1P02100 147 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 H2AFB1P0C5Y9 115 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 HLA-DMBP28068 263 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 CSN1S1P47710 185 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 FHITP49789 147 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 PPT1P50897 306 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 RANP62826 216 aaKnown RBP5.57□□□□□ -1.52
ABCD4-220ENST00000553998 ICAM4Q14773 271 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 ZNF124Q15973 351 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 SSX7Q7RTT5 188 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 POM121L12Q8N7R1 296 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 Q8NAQ8 132 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 OR10J6PQ8NGY7 276 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 CMTM2Q8TAZ6 248 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 SFT2D1Q8WV19 159 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 NKX6-2Q9C056 277 aaPredicted RBP5.57□□□□□ -1.52
ABCD4-220ENST00000553998 Q9H3A6 140 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 BOLA1Q9Y3E2 137 aa5.57□□□□□ -1.52
ABCD4-220ENST00000553998 IGHV4-4A0A075B6R2 117 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 SERTM2A0A1B0GWG4 89 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 RBAKDNA6NC62 111 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 PGPA6NDG6 321 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 ZNF705FA8MVS1 300 aaPredicted RBP5.56□□□□□ -1.52
ABCD4-220ENST00000553998 F6UB75 175 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 BOLA2-SMG1P6H3BVE0 249 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 M0R3E3 92 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 AMBPP02760 352 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 SLC25A5P05141 298 aaKnown RBP5.56□□□□□ -1.52
ABCD4-220ENST00000553998 CNN1P51911 297 aaKnown RBP5.56□□□□□ -1.52
ABCD4-220ENST00000553998 BLOC1S1P78537 153 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 HIST1H1AQ02539 215 aaPredicted RBP5.56□□□□□ -1.52
ABCD4-220ENST00000553998 GDF5OSQ5U4N7 250 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 IQCF2Q8IXL9 164 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 EXOC3-AS1Q8N2X6 119 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 C5orf17Q8NAS9 161 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 TCEAL7Q9BRU2 100 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 C1QTNF4Q9BXJ3 329 aa5.56□□□□□ -1.52
ABCD4-220ENST00000553998 TRAV10A0A0B4J240 114 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 TRBV7-9A0A0J9YWB2 115 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 PRAC2D3DTV9 90 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 NPIPB6E9PJ23 425 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 CA1P00915 261 aaPredicted RBP5.55□□□□□ -1.52
ABCD4-220ENST00000553998 P0DMU3 169 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 FAM231AP0DMU4 169 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 FAM231CP0DMU5 169 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 TSPOP30536 169 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 FGF8P55075 233 aaPredicted RBP5.55□□□□□ -1.52
ABCD4-220ENST00000553998 DEFB1P60022 68 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 AMTNQ6UX39 209 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 ALKAL2Q6UX46 152 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 Q6ZR54 194 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 ZNF575Q86XF7 245 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 OR4B1Q8NGF8 309 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 LINC00477Q96M19 166 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 ODF3Q96PU9 254 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 TMPRSS5Q9H3S3 457 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 PPP1R14DQ9NXH3 145 aa5.55□□□□□ -1.52
ABCD4-220ENST00000553998 FBLL1A6NHQ2 334 aaKnown RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 FAM74A7A6NL05 159 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 ZNF705EA8MWA4 302 aaPredicted RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 GGTLC3B5MD39 225 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 DEFB4AO15263 64 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 GIG44P09565 113 aaPredicted RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 RBMY1A1P0DJD3 496 aaKnown RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 RBMY1CP0DJD4 496 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 TAGLN2P37802 199 aaKnown RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 RBMY1FQ15415 496 aaKnown RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 TEX261Q6UWH6 196 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 C9orf47Q6ZRZ4 202 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 Q6ZTC4 211 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 HIST1H2BAQ96A08 127 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 TXNDC17Q9BRA2 123 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 MANBALQ9NQG1 85 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 YTHDF2Q9Y5A9 579 aaKnown RBP5.54□□□□□ -1.52
ABCD4-220ENST00000553998 LENEPQ9Y5L5 61 aa5.54□□□□□ -1.52
ABCD4-220ENST00000553998 IGKV2-40A0A087WW87 121 aaPredicted RBP5.53□□□□□ -1.52
ABCD4-220ENST00000553998 F6UZH7 168 aa5.53□□□□□ -1.52
ABCD4-220ENST00000553998 K7EQM0 130 aa5.53□□□□□ -1.52
ABCD4-220ENST00000553998 IFNA1P01562 189 aa5.53□□□□□ -1.52
ABCD4-220ENST00000553998 IFNA7P01567 189 aa5.53□□□□□ -1.52
ABCD4-220ENST00000553998 IGKV2D-40P01614 121 aaPredicted RBP5.53□□□□□ -1.52
ABCD4-220ENST00000553998 IGKV3-20P01619 116 aa5.53□□□□□ -1.52
ABCD4-220ENST00000553998 TCRAP04437 139 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms