RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CLEC3BP05452 202 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 GPR183P32249 361 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
SHMT2-205ENST00000553474 PAX8Q06710 450 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 ECSCRQ19T08 205 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 C5orf56Q8N8D9 126 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 C8orf49Q96NF6 230 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 SMAD5-AS1Q9Y6J3 95 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 U3KQK5 164 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 FAM223BA6NKX1 122 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 IGHV3-23P01764 117 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 LCN12Q6JVE5 192 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 LYZL1Q6UWQ5 148 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 Q6ZN92 141 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 FAM223AQ8IWN6 122 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 MOB4Q9Y3A3 225 aa10.01□□□□□ -0.81
SHMT2-205ENST00000553474 APCP25054 2843 aa10□□□□□ -0.81
SHMT2-205ENST00000553474 OR4C46A6NHA9 309 aa10□□□□□ -0.81
SHMT2-205ENST00000553474 FABP5P3A8MUU1 101 aa10□□□□□ -0.81
SHMT2-205ENST00000553474 BRI3O95415 125 aa10□□□□□ -0.81
SHMT2-205ENST00000553474 IGHG4P01861 327 aa10□□□□□ -0.81
SHMT2-205ENST00000553474 FAM104BQ5XKR9 115 aa10□□□□□ -0.81
SHMT2-205ENST00000553474 IGKV2-40A0A087WW87 121 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-205ENST00000553474 IGKV2D-40P01614 121 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-205ENST00000553474 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 G0S2P27469 103 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 GAGE1Q13065 139 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 FA2HQ7L5A8 372 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 ORMDL3Q8N138 153 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 PIP4P2Q8N4L2 257 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 CCDC140Q96MF4 163 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 METTL26Q96S19 204 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 PIMREGQ9BSJ6 248 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 MEGF9Q9H1U4 602 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 LAMTOR2Q9Y2Q5 125 aa9.99□□□□□ -0.81
SHMT2-205ENST00000553474 TSPOP30536 169 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 Q71RC1 249 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-205ENST00000553474 FER1L6-AS1Q8NA97 138 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 PRSS3P2Q8NHM4 247 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 ASCL2Q99929 193 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 FLNBO75369 2602 aaKnown RBP9.98□□□□□ -0.81
SHMT2-205ENST00000553474 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 H3BUA1 57 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 IGHV1-69P01742 117 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 IGHV4-39P01824 125 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 PPBPP02775 128 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 IGLL1P15814 213 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 ATP5G2Q06055 141 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 C19orf54Q5BKX5 351 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 NPFFR1Q9GZQ6 430 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 MS4A6AQ9H2W1 248 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 U3KQE9 123 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 ITPR2Q14571 2701 aa9.98□□□□□ -0.81
SHMT2-205ENST00000553474 NAV2Q8IVL1 2488 aa9.97□□□□□ -0.81
SHMT2-205ENST00000553474 CLPSL1A2RUU4 121 aa9.97□□□□□ -0.81
SHMT2-205ENST00000553474 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
SHMT2-205ENST00000553474 VGLL1Q99990 258 aa9.97□□□□□ -0.81
SHMT2-205ENST00000553474 TPPP3Q9BW30 176 aa9.97□□□□□ -0.81
SHMT2-205ENST00000553474 TRAV41A0A0B4J266 112 aa9.96□□□□□ -0.81
SHMT2-205ENST00000553474 M0QZ24 198 aa9.96□□□□□ -0.81
SHMT2-205ENST00000553474 HIST1H1AQ02539 215 aaPredicted RBP9.96□□□□□ -0.81
SHMT2-205ENST00000553474 LINC01545Q5VT33 79 aa9.96□□□□□ -0.81
SHMT2-205ENST00000553474 ATOH7Q8N100 152 aa9.96□□□□□ -0.81
SHMT2-205ENST00000553474 PRELID3AQ96N28 172 aa9.96□□□□□ -0.81
SHMT2-205ENST00000553474 ASH1LQ9NR48 2969 aaKnown RBP9.96□□□□□ -0.82
SHMT2-205ENST00000553474 D6R8Y8 96 aa9.96□□□□□ -0.82
SHMT2-205ENST00000553474 G3V318 75 aa9.96□□□□□ -0.82
SHMT2-205ENST00000553474 IGF1P05019 195 aa9.96□□□□□ -0.82
SHMT2-205ENST00000553474 ZNF747Q9BV97 191 aa9.96□□□□□ -0.82
SHMT2-205ENST00000553474 LENEPQ9Y5L5 61 aa9.96□□□□□ -0.82
SHMT2-205ENST00000553474 CSMD2Q7Z408 3487 aa9.95□□□□□ -0.82
SHMT2-205ENST00000553474 J3KRW8 73 aa9.95□□□□□ -0.82
SHMT2-205ENST00000553474 ATP5J2P56134 94 aa9.95□□□□□ -0.82
SHMT2-205ENST00000553474 DPF1Q92782 380 aa9.95□□□□□ -0.82
SHMT2-205ENST00000553474 MED13LQ71F56 2210 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 CSN3P07498 182 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 ZNF80P51504 273 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-205ENST00000553474 TMEM78Q5T7P6 136 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 C9orf47Q6ZRZ4 202 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 Q8TAT8 98 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 C10orf105Q8TEF2 133 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 USMG5Q96IX5 58 aa9.94□□□□□ -0.82
SHMT2-205ENST00000553474 TMSB15BA0A087X1C1 80 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 TMEM213A2RRL7 107 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 DLEU1O43261 78 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 ORM1P02763 201 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 ZNF25P17030 456 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-205ENST00000553474 ZNF138P52744 262 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 TWIST1Q15672 202 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 MRPL51Q4U2R6 128 aaKnown RBP9.93□□□□□ -0.82
SHMT2-205ENST00000553474 C9orf139Q6ZV77 190 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 AMN1Q8IY45 258 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 PIFOQ8TCI5 191 aa9.93□□□□□ -0.82
SHMT2-205ENST00000553474 SIGLEC8Q9NYZ4 499 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms