RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 GCSAMLQ5JQS6 135 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 Q5VSD8 79 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 TMEM14EPQ6UXP3 125 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 EXOC3-AS1Q8N2X6 119 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 LINC00612Q8N6U2 182 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 LRTM2Q8N967 370 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 RCL1Q9Y2P8 373 aaKnown RBP4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 MRPS16Q9Y3D3 137 aaKnown RBP4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
PRPF40B-214ENST00000551320 TRGV2A0A075B6R0 118 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 LOC100131303A0A0U1RQF7 123 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 C7orf66A4D0T2 115 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 FAM24AA6NFZ4 105 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 SNURFLB1AK76 121 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 E5RGE8 158 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 H7BYZ3 331 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 GOSR2O14653 212 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 PRAF2O60831 178 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 MBPP02686 304 aaPredicted RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 SLC25A6P12236 298 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 ATP5IP56385 69 aaPredicted RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 RPP30P78346 268 aaKnown RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 IAH1Q2TAA2 248 aaPredicted RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 CCDC28AQ8IWP9 274 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 TMEM256Q8N2U0 113 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 OR10J6PQ8NGY7 276 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 BLNKQ8WV28 456 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 SAT2Q96F10 170 aaPredicted RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 SMIM8Q96KF7 97 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 LINC00477Q96M19 166 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 GPR82Q96P67 336 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 CIB3Q96Q77 187 aaPredicted RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 VGLL1Q99990 258 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 FUT9Q9Y231 359 aa4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 LSM5Q9Y4Y9 91 aaKnown RBP4.65□□□□□ -1.67
PRPF40B-214ENST00000551320 DUXBA0A1W2PPF3 345 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 CCDC160A6NGH7 325 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 FAM25EA8MYX2 175 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 NDUFB4O95168 129 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 CFDP00746 253 aaPredicted RBP4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 OR4E1P0C645 316 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 IGLC2P0DOY2 106 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 BTCP35070 178 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 TMBIM6P55061 237 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 PLP1P60201 277 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 B2MP61769 119 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 C4orf46Q504U0 113 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 MUC21Q5SSG8 566 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 C10orf113Q5VZT2 155 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 FAM122CQ6P4D5 195 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 NRARPQ7Z6K4 114 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 WFDC10BQ8IUB3 73 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 LYPD1Q8N2G4 141 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 Q8TAT8 98 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 SDHCQ99643 169 aaPredicted RBP4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 AGPAT4-IT1Q9H0P7 198 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 NPVFQ9HCQ7 196 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 MGAT4CQ9UBM8 478 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 CACFD1Q9UGQ2 172 aa4.64□□□□□ -1.67
PRPF40B-214ENST00000551320 A0A087WTM6 91 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 C7orf71A4D174 169 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 SIVA1O15304 175 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 ZNF324O75467 553 aaPredicted RBP4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 FAUP35544 74 aaKnown RBP4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 CAMLGP49069 296 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 BCAP31P51572 246 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 TTC32Q5I0X7 151 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 SAMD13Q5VXD3 122 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 LYPD5Q6UWN5 251 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 LCN15Q6UWW0 184 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 Q6ZNX1 250 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 ZNF493Q6ZR52 646 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 BPIFA4PQ86YQ2 179 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 OR10P1Q8NGE3 313 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 ZNF479Q96JC4 524 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 SEC22CQ9BRL7 303 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 UPK3BQ9BT76 320 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 SRRQ9GZT4 340 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
PRPF40B-214ENST00000551320 TRAV6A0A075B6T7 132 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 IGSF23A1L1A6 192 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 NDUFB6O95139 128 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 LEPP41159 167 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 CAV2P51636 162 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 AP3S2P59780 193 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 SELENOTP62341 195 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 FOXI1Q12951 378 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 FHL2Q14192 279 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 LINC01620Q4KN68 170 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 MIR17HGQ75NE6 70 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 SLC25A21Q9BQT8 299 aaPredicted RBP4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 SLC50A1Q9BRV3 221 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 DNAJC4Q9NNZ3 241 aa4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
PRPF40B-214ENST00000551320 TRBV19A0A075B6N1 114 aa4.61□□□□□ -1.67
PRPF40B-214ENST00000551320 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms