RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CENPXA8MT69 81 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 H3BNG1 76 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 LYRM1O43325 122 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 IGKV2D-40P01614 121 aaPredicted RBP7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 IGHV3-53P01767 116 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 TCRBP04435 133 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 RNASE4P34096 147 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 RPL29P47914 159 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 RAB32Q13637 225 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 Q6ZRG5 221 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 TMEM252Q8N6L7 170 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 BLNKQ8WV28 456 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 VGLL1Q99990 258 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 FUT9Q9Y231 359 aa7.91□□□□□ -1.14
PRPF40B-212ENST00000551111 TRGV2A0A075B6R0 118 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 SLC25A5P05141 298 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 S100A10P60903 97 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 BAXQ07812 192 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 ZNF846Q147U1 533 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 GUK1Q16774 197 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 TTC32Q5I0X7 151 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 C12orf45Q8N5I9 185 aaPredicted RBP7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 ZFAND2AQ8N6M9 145 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 OR1L4Q8NGR5 311 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 FAM167A-AS1Q96KT0 104 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 C2orf50Q96LR7 162 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 NUDT15Q9NV35 164 aa7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 MRPL16Q9NX20 251 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-212ENST00000551111 A0A1W2PPQ1 181 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 SPINK4O60575 86 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 ZNF253O75346 499 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 HIST1H1EP10412 219 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 BTF3P20290 206 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 FGF7P21781 194 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 SULT1A1P50225 295 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 RAB31Q13636 194 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 ICAM4Q14773 271 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 MIR17HGQ75NE6 70 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 EIF4E3Q8N5X7 224 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 MRPL53Q96EL3 112 aaKnown RBP7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 PFDN5Q99471 154 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 LYRM2Q9NU23 88 aaPredicted RBP7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 TMEM14CQ9P0S9 112 aa7.89□□□□□ -1.15
PRPF40B-212ENST00000551111 CRISP2P16562 243 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 TCL1AP56279 114 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 NHLH2Q02577 135 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 FAM122CQ6P4D5 195 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 C9orf47Q6ZRZ4 202 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 Q8TAT8 98 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 CHAC2Q8WUX2 184 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 LINC00477Q96M19 166 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 C18orf15Q96N68 181 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 LINC00467Q9BRT7 94 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 TIMM9Q9Y5J7 89 aa7.88□□□□□ -1.15
PRPF40B-212ENST00000551111 SIVA1O15304 175 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 PAX4O43316 350 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 PRAF2O60831 178 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 MPDU1O75352 247 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 NXPH4O95158 308 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 SIX6O95475 246 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 GPX1P07203 203 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 DNAH10OSP0CZ25 163 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 S100A11P31949 105 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 XGP55808 180 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 FHL2Q14192 279 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 CNPY1Q3B7I2 92 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 ZNF680Q8NEM1 530 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 C8orf49Q96NF6 230 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 NPCDR1Q9BY65 106 aa7.87□□□□□ -1.15
PRPF40B-212ENST00000551111 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 SFTA3P0C7M3 94 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 LYPD5Q6UWN5 251 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 PHYHIPLQ96FC7 376 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 ST6GAL2Q96JF0 529 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 GPN1Q9HCN4 374 aaPredicted RBP7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 MDFICQ9P1T7 246 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 ZNF492Q9P255 531 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 PRELID1Q9Y255 219 aa7.86□□□□□ -1.15
PRPF40B-212ENST00000551111 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 IGHV1OR15-1A0A075B7D0 117 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 H0YIZ8 118 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 OR10J4P0C629 311 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 NBEAP1P0C6P0 100 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 PVALBP20472 110 aaPredicted RBP7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 CRYBA4P53673 196 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 PDE6HQ13956 83 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 MUC21Q5SSG8 566 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 FXYD5Q96DB9 178 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 OR5AC2Q9NZP5 309 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 ICOSQ9Y6W8 199 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 VPS13BQ7Z7G8 4022 aa7.85□□□□□ -1.15
PRPF40B-212ENST00000551111 E5RGE8 158 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 RGS13O14921 159 aa7.84□□□□□ -1.15
PRPF40B-212ENST00000551111 HBG1P69891 147 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms