RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SLC25A5P05141 298 aaKnown RBP11.34□□□□□ -0.59
DDX55-212ENST00000544738 CCL18P55774 89 aa11.34□□□□□ -0.59
DDX55-212ENST00000544738 LRRC37A5PQ49AS3 106 aa11.34□□□□□ -0.59
DDX55-212ENST00000544738 OR5AC2Q9NZP5 309 aa11.34□□□□□ -0.59
DDX55-212ENST00000544738 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 M0R3E3 92 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 INAFM2P0DMQ5 153 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 PYYP10082 97 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 GCSAMLQ5JQS6 135 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 LINC00612Q8N6U2 182 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 BLNKQ8WV28 456 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 MARVELD1Q9BSK0 173 aa11.33□□□□□ -0.6
DDX55-212ENST00000544738 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 DEFA1P59665 94 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 DEFA3P59666 94 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 IFITM3Q01628 133 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 CLINT1Q14677 625 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 MRPL32Q9BYC8 188 aaKnown RBP11.32□□□□□ -0.6
DDX55-212ENST00000544738 WDR61Q9GZS3 305 aaKnown RBP11.32□□□□□ -0.6
DDX55-212ENST00000544738 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 OR51M1Q9H341 326 aa11.32□□□□□ -0.6
DDX55-212ENST00000544738 NACAE9PAV3 2078 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 C7orf71A4D174 169 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 H0YIZ8 118 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 NMBP08949 121 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 PET100P0DJ07 73 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
DDX55-212ENST00000544738 ERCC8Q13216 396 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 OR5I1Q13606 314 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 ICAM4Q14773 271 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 TMEM78Q5T7P6 136 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 EXOC3-AS1Q8N2X6 119 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 ZNF680Q8NEM1 530 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 GNPNAT1Q96EK6 184 aaPredicted RBP11.31□□□□□ -0.6
DDX55-212ENST00000544738 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 FAM167A-AS1Q96KT0 104 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 LINC00467Q9BRT7 94 aa11.31□□□□□ -0.6
DDX55-212ENST00000544738 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 KLLNB2CW77 178 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 GAGE7O76087 117 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 GAGE12FP0CL80 117 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 GAGE12GP0CL81 117 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 GAGE12IP0CL82 117 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 M6PRP20645 277 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 H2BFSP57053 126 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 MIR17HGQ75NE6 70 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 ZNRF2Q8NHG8 242 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 PPP1R1CQ8WVI7 109 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 FAM19A4Q96LR4 140 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 FUT9Q9Y231 359 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 FAT1Q14517 4588 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 UBR4Q5T4S7 5183 aa11.3□□□□□ -0.6
DDX55-212ENST00000544738 H3BNG1 76 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 SSNA1O43805 119 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
DDX55-212ENST00000544738 GPX1P07203 203 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 CRISP2P16562 243 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 FAM122CQ6P4D5 195 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 ATP5SQ99766 215 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 MYCBP2O75592 4640 aa11.29□□□□□ -0.6
DDX55-212ENST00000544738 TRAV26-1A0A087WT03 109 aa11.28□□□□□ -0.6
DDX55-212ENST00000544738 NBDYA0A0U1RRE5 68 aa11.28□□□□□ -0.6
DDX55-212ENST00000544738 MPC2O95563 127 aa11.28□□□□□ -0.6
DDX55-212ENST00000544738 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
DDX55-212ENST00000544738 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
DDX55-212ENST00000544738 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
DDX55-212ENST00000544738 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
DDX55-212ENST00000544738 LINC00588Q9Y4M8 146 aa11.28□□□□□ -0.6
DDX55-212ENST00000544738 TRBV7-9A0A0J9YWB2 115 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 IFNA5P01569 189 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 CSN1S1P47710 185 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 CD300CQ08708 224 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 SSX7Q7RTT5 188 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 LYPD1Q8N2G4 141 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 C18orf15Q96N68 181 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 HSPB11Q9Y547 144 aa11.27□□□□□ -0.61
DDX55-212ENST00000544738 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 IGKV2-40A0A087WW87 121 aaPredicted RBP11.26□□□□□ -0.61
DDX55-212ENST00000544738 OR7C2O60412 319 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 IGKV2D-40P01614 121 aaPredicted RBP11.26□□□□□ -0.61
DDX55-212ENST00000544738 OR10J4P0C629 311 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 HOXA5P20719 270 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 RPL12P30050 165 aaKnown RBP11.26□□□□□ -0.61
DDX55-212ENST00000544738 BTN1A1Q13410 526 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 Q6ZTI0 123 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 C11orf72Q8NBR9 251 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 VGLL1Q99990 258 aa11.26□□□□□ -0.61
DDX55-212ENST00000544738 A0A0J9YY99 117 aa11.25□□□□□ -0.61
DDX55-212ENST00000544738 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms