RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PRB3Q04118 309 aaPredicted RBP8.97□□□□□ -0.97
CDH4-201ENST00000543233 FOXC1Q12948 553 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 PRR30Q53SZ7 412 aaPredicted RBP8.97□□□□□ -0.97
CDH4-201ENST00000543233 ZC2HC1BQ5TFG8 222 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 RND1Q92730 232 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 ZNF503Q96F45 646 aa8.97□□□□□ -0.97
CDH4-201ENST00000543233 LINC01549A6NIU2 74 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 C9JAW5 83 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 HBDP02042 147 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 DUTP33316 252 aaKnown RBP8.96□□□□□ -0.97
CDH4-201ENST00000543233 C9orf153Q5TBE3 101 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 OR13C6PQ8NH95 151 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 RPEQ96AT9 228 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 C21orf62Q9NYP8 219 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 CALYQ9NYX4 217 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 SLC25A10Q9UBX3 287 aaPredicted RBP8.96□□□□□ -0.97
CDH4-201ENST00000543233 HIGD1AQ9Y241 93 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 MALRD1Q5VYJ5 2156 aa8.96□□□□□ -0.97
CDH4-201ENST00000543233 ATP5IP56385 69 aaPredicted RBP8.96□□□□□ -0.98
CDH4-201ENST00000543233 MZT1Q08AG7 82 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 Q6ZS92 163 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 FAM90A1Q86YD7 464 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 OR10J6PQ8NGY7 276 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 S1PR3Q99500 378 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 ASH1LQ9NR48 2969 aaKnown RBP8.96□□□□□ -0.98
CDH4-201ENST00000543233 TMEM160Q9NX00 188 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 KLF17Q5JT82 389 aaPredicted RBP8.96□□□□□ -0.98
CDH4-201ENST00000543233 TMEM78Q5T7P6 136 aa8.96□□□□□ -0.98
CDH4-201ENST00000543233 NAV3Q8IVL0 2385 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 LINC00322Q6ZN03 302 aaPredicted RBP8.95□□□□□ -0.98
CDH4-201ENST00000543233 A0A096LNJ9 63 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 OOSP1A8MZH6 123 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 J3KT08 172 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 PLAUP00749 431 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 C8orf88P0DMB2 117 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 ERVK-16P61578 105 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 C3orf36Q3SXR2 165 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 TMEM155Q4W5P6 130 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 MOB3BQ86TA1 216 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 OR1L4Q8NGR5 311 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 CCL17Q92583 94 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 TMEM133Q9H2Q1 129 aa8.95□□□□□ -0.98
CDH4-201ENST00000543233 NPFFO15130 113 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 IGHV1-46P01743 117 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 CD40P25942 277 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 RASL10AQ92737 203 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 SPANXA1Q9NS26 97 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 KLK5Q9Y337 293 aaPredicted RBP8.94□□□□□ -0.98
CDH4-201ENST00000543233 PTPRBP23467 1997 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 D6R8Y8 96 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 RNF7Q9UBF6 113 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 RAXQ9Y2V3 346 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 DSCAML1Q8TD84 2053 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 NDUFS7O75251 213 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 ARMS2P0C7Q2 107 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
CDH4-201ENST00000543233 PRB4P10163 310 aaPredicted RBP8.94□□□□□ -0.98
CDH4-201ENST00000543233 GFRALQ6UXV0 394 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 FOXC2Q99958 501 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 IFI27L2Q9H2X8 130 aa8.94□□□□□ -0.98
CDH4-201ENST00000543233 IGKCP01834 107 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 EIF4EBP1Q13541 118 aaPredicted RBP8.93□□□□□ -0.98
CDH4-201ENST00000543233 A0A0G2JNJ9 132 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 CCL3L1P16619 93 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 DLX1P56177 255 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 LOXL3P58215 753 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 SRSF2Q01130 221 aaKnown RBP8.93□□□□□ -0.98
CDH4-201ENST00000543233 MORN5Q5VZ52 161 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
CDH4-201ENST00000543233 C1orf159Q96HA4 380 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 Q9UFV3 132 aa8.93□□□□□ -0.98
CDH4-201ENST00000543233 H3BTX0 84 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 ENSAO43768 121 aaKnown RBP8.92□□□□□ -0.98
CDH4-201ENST00000543233 P0C879 139 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 MORN3Q6PF18 240 aaPredicted RBP8.92□□□□□ -0.98
CDH4-201ENST00000543233 MAPKAPK5-AS1Q8N8E1 139 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 TET2Q6N021 2002 aaPredicted RBP8.92□□□□□ -0.98
CDH4-201ENST00000543233 A0A1B0GUT8 65 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 WIPF1O43516 503 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 BSPH1Q075Z2 132 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 LINC01587Q99440 93 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 PAXXQ9BUH6 204 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 EPG5Q9HCE0 2579 aa8.92□□□□□ -0.98
CDH4-201ENST00000543233 IGHV3-48P01763 117 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 PRR20EP86478 221 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 PRR20CP86479 221 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 PRR20DP86480 221 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 PRR20BP86481 221 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 PRR20AP86496 221 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 RIGQ13278 110 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 C17orf58Q2M2W7 97 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 ZNF329Q86UD4 541 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 FAM57AQ8TBR7 257 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 TRAV8-4A0A0B4J246 113 aa8.91□□□□□ -0.98
CDH4-201ENST00000543233 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms