RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TIRAPP58753 221 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 DGAT2L7PQ6IED9 249 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 Q6ZN92 141 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 SPATA12Q7Z6I5 190 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 CNFNQ9BYD5 112 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 AP5S1Q9NUS5 200 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 MRPS16Q9Y3D3 137 aaKnown RBP5.06□□□□□ -1.6
PTPRO-208ENST00000542557 COL6A6A6NMZ7 2263 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 SPTBN1Q01082 2364 aaKnown RBP5.06□□□□□ -1.6
PTPRO-208ENST00000542557 OR4C46A6NHA9 309 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 FAM223BA6NKX1 122 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 COL5A1-AS1Q5SY13 56 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 FAM223AQ8IWN6 122 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 ATOH7Q8N100 152 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 FER1L6-AS1Q8NA97 138 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 Q8TAT8 98 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 PSMG3-AS1Q96PY0 264 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 VGLL1Q99990 258 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 MAP1LC3CQ9BXW4 147 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 TMEM191AQ9H0A3 160 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 U3KQE9 123 aa5.06□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV1-69DA0A0B4J2H0 117 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 G3V318 75 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 BRI3O95415 125 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV1-69P01742 117 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 IGLL1P15814 213 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 TSPOP30536 169 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 CLEC19AQ6UXS0 136 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 WFDC12Q8WWY7 111 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 METTL26Q96S19 204 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 HIF1ANQ9NWT6 349 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 SAP30O75446 220 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 HLA-DMBP28068 263 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 ZNF80P51504 273 aaPredicted RBP5.05□□□□□ -1.6
PTPRO-208ENST00000542557 LINC00173Q6ZV60 143 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 FA2HQ7L5A8 372 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 ORMDL3Q8N138 153 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 MEGF9Q9H1U4 602 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 LAMTOR2Q9Y2Q5 125 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 WNK2Q9Y3S1 2297 aa5.05□□□□□ -1.6
PTPRO-208ENST00000542557 TMSB15BA0A087X1C1 80 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 TRAV41A0A0B4J266 112 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 TMEM213A2RRL7 107 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 LINC01548A6NM66 108 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 FABP5P3A8MUU1 101 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 D6R8Y8 96 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 ATP5G2Q06055 141 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 GAGE1Q13065 139 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 LINC01545Q5VT33 79 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 OR10AG1Q8NH19 301 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 PIFOQ8TCI5 191 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 C10orf105Q8TEF2 133 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 TRAV25A0A0B4J276 109 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV3-35A0A0C4DH35 117 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 IGF1P05019 195 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 CSN3P07498 182 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 PRB4P10163 310 aaPredicted RBP5.04□□□□□ -1.6
PTPRO-208ENST00000542557 ZNF138P52744 262 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 IGFL4Q6B9Z1 124 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 ZNF575Q86XF7 245 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 AMN1Q8IY45 258 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 PRSS3P2Q8NHM4 247 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 PRELID3AQ96N28 172 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 FAM110AQ9BQ89 295 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 ZNF747Q9BV97 191 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 CHD8Q9HCK8 2581 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 ABCA2Q9BZC7 2435 aa5.04□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV3OR16-8A0A075B7F1 116 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 TRAV8-2A0A0B4J237 113 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 IGHV4-61A0A0C4DH41 118 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 PRAC2D3DTV9 90 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 H3BUA1 57 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 HIST1H1AQ02539 215 aaPredicted RBP5.03□□□□□ -1.6
PTPRO-208ENST00000542557 MRPL51Q4U2R6 128 aaKnown RBP5.03□□□□□ -1.6
PTPRO-208ENST00000542557 NPFFR1Q9GZQ6 430 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 MS4A6AQ9H2W1 248 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 NCOR2Q9Y618 2525 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 TRAV40A0A0B4J280 105 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 BATFQ16520 125 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 C8orf86Q6ZUL3 223 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 TMEM219Q86XT9 240 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 CCL19Q99731 98 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 CDIP1Q9H305 208 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 SIGLEC8Q9NYZ4 499 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 A0A096LNJ9 63 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 DLEU1O43261 78 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 PPBPP02775 128 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 IFI27P40305 119 aaPredicted RBP5.03□□□□□ -1.6
PTPRO-208ENST00000542557 ERCC8Q13216 396 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 TWIST1Q15672 202 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 C9orf47Q6ZRZ4 202 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 RNF182Q8N6D2 247 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 TMEM208Q9BTX3 173 aa5.03□□□□□ -1.6
PTPRO-208ENST00000542557 ORM1P02763 201 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 ZNF25P17030 456 aaPredicted RBP5.02□□□□□ -1.61
PTPRO-208ENST00000542557 TMEM78Q5T7P6 136 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 C9orf139Q6ZV77 190 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms