RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SMIM12Q96EX1 92 aa20.89■□□□□ 0.93
CCM2-218ENST00000541586 MLST8Q9BVC4 326 aa20.89■□□□□ 0.93
CCM2-218ENST00000541586 PSG8Q9UQ74 426 aa20.89■□□□□ 0.93
CCM2-218ENST00000541586 C20orf173Q96LM9 149 aa20.88■□□□□ 0.93
CCM2-218ENST00000541586 H7BYZ3 331 aa20.87■□□□□ 0.93
CCM2-218ENST00000541586 GBGT1Q8N5D6 347 aa20.87■□□□□ 0.93
CCM2-218ENST00000541586 CXorf65A6NEN9 183 aa20.87■□□□□ 0.93
CCM2-218ENST00000541586 CSN3P07498 182 aa20.87■□□□□ 0.93
CCM2-218ENST00000541586 DCANP1Q8TF63 244 aa20.87■□□□□ 0.93
CCM2-218ENST00000541586 VGLL1Q99990 258 aa20.87■□□□□ 0.93
CCM2-218ENST00000541586 MS4A6AQ9H2W1 248 aa20.86■□□□□ 0.93
CCM2-218ENST00000541586 PPP1R2P9O14990 202 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 ERVFC1-1P60608 527 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 OXLD1Q5BKU9 147 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 TMEM183AQ8IXX5 376 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 OR10G8Q8NGN5 311 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 ASCL2Q99929 193 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 MCRIP2Q9BUT9 160 aaKnown RBP20.85■□□□□ 0.93
CCM2-218ENST00000541586 ZFP30Q9Y2G7 519 aa20.85■□□□□ 0.93
CCM2-218ENST00000541586 RNASE7Q9H1E1 156 aaKnown RBP20.84■□□□□ 0.93
CCM2-218ENST00000541586 RBAKDNA6NC62 111 aa20.84■□□□□ 0.93
CCM2-218ENST00000541586 SAMD13Q5VXD3 122 aa20.84■□□□□ 0.93
CCM2-218ENST00000541586 WFDC3Q8IUB2 231 aa20.84■□□□□ 0.93
CCM2-218ENST00000541586 ZNF738Q8NE65 137 aa20.84■□□□□ 0.93
CCM2-218ENST00000541586 URGCP-MRPS24S4R325 110 aa20.84■□□□□ 0.93
CCM2-218ENST00000541586 C9orf66Q5T8R8 295 aa20.83■□□□□ 0.92
CCM2-218ENST00000541586 PRR27Q6MZM9 219 aa20.83■□□□□ 0.92
CCM2-218ENST00000541586 FBLL1A6NHQ2 334 aaKnown RBP20.82■□□□□ 0.92
CCM2-218ENST00000541586 ERCC8Q13216 396 aa20.82■□□□□ 0.92
CCM2-218ENST00000541586 FAM24BQ8N5W8 94 aa20.82■□□□□ 0.92
CCM2-218ENST00000541586 C15orf54Q8N8G6 183 aa20.82■□□□□ 0.92
CCM2-218ENST00000541586 YPEL4Q96NS1 127 aa20.82■□□□□ 0.92
CCM2-218ENST00000541586 OSTCQ9NRP0 149 aa20.82■□□□□ 0.92
CCM2-218ENST00000541586 COLCA2A8K830 154 aa20.81■□□□□ 0.92
CCM2-218ENST00000541586 TFPI2P48307 235 aa20.81■□□□□ 0.92
CCM2-218ENST00000541586 DYNLRB2Q8TF09 96 aa20.81■□□□□ 0.92
CCM2-218ENST00000541586 ID1P41134 155 aa20.81■□□□□ 0.92
CCM2-218ENST00000541586 IBA57Q5T440 356 aaKnown RBP20.81■□□□□ 0.92
CCM2-218ENST00000541586 Q8TAT8 98 aa20.81■□□□□ 0.92
CCM2-218ENST00000541586 ELOBQ15370 118 aa20.8■□□□□ 0.92
CCM2-218ENST00000541586 V9GYV3 84 aa20.8■□□□□ 0.92
CCM2-218ENST00000541586 K7EQG2 157 aa20.79■□□□□ 0.92
CCM2-218ENST00000541586 FAM231DQ6ZW35 169 aa20.79■□□□□ 0.92
CCM2-218ENST00000541586 BIN3Q9NQY0 253 aa20.79■□□□□ 0.92
CCM2-218ENST00000541586 G3V4G9 280 aa20.78■□□□□ 0.92
CCM2-218ENST00000541586 LINC00322Q6ZN03 302 aaPredicted RBP20.78■□□□□ 0.92
CCM2-218ENST00000541586 ZC2HC1AQ96GY0 325 aa20.78■□□□□ 0.92
CCM2-218ENST00000541586 PRR25Q96S07 402 aa20.78■□□□□ 0.92
CCM2-218ENST00000541586 AGPAT4-IT1Q9H0P7 198 aa20.78■□□□□ 0.92
CCM2-218ENST00000541586 C8orf49Q96NF6 230 aa20.78■□□□□ 0.92
CCM2-218ENST00000541586 SIGLEC8Q9NYZ4 499 aa20.78■□□□□ 0.92
CCM2-218ENST00000541586 PFN1P07737 140 aaKnown RBP20.77■□□□□ 0.92
CCM2-218ENST00000541586 INSL3P51460 131 aa20.77■□□□□ 0.92
CCM2-218ENST00000541586 DEFB114Q30KQ6 69 aa20.77■□□□□ 0.92
CCM2-218ENST00000541586 SAPCD1Q5SSQ6 148 aa20.77■□□□□ 0.92
CCM2-218ENST00000541586 NUDT10Q8NFP7 164 aa20.77■□□□□ 0.92
CCM2-218ENST00000541586 NUDT11Q96G61 164 aa20.77■□□□□ 0.92
CCM2-218ENST00000541586 GPR61Q9BZJ8 451 aa20.77■□□□□ 0.92
CCM2-218ENST00000541586 ZNF705DP0CH99 300 aaPredicted RBP20.76■□□□□ 0.91
CCM2-218ENST00000541586 ZNF705BP0CI00 300 aaPredicted RBP20.76■□□□□ 0.91
CCM2-218ENST00000541586 DEFB1P60022 68 aa20.76■□□□□ 0.91
CCM2-218ENST00000541586 PAFAH1B2P68402 229 aa20.76■□□□□ 0.91
CCM2-218ENST00000541586 C9orf47Q6ZRZ4 202 aa20.76■□□□□ 0.91
CCM2-218ENST00000541586 ZNF492Q9P255 531 aa20.76■□□□□ 0.91
CCM2-218ENST00000541586 TMEM78Q5T7P6 136 aa20.75■□□□□ 0.91
CCM2-218ENST00000541586 RBPMS2Q6ZRY4 209 aaKnown RBP20.75■□□□□ 0.91
CCM2-218ENST00000541586 TMEM61Q8N0U2 210 aa20.75■□□□□ 0.91
CCM2-218ENST00000541586 C19orf71A6NCJ1 209 aa20.75■□□□□ 0.91
CCM2-218ENST00000541586 TGIF2-C20orf24A0A0A6YYL0 155 aa20.74■□□□□ 0.91
CCM2-218ENST00000541586 ZNF705GA8MUZ8 300 aaPredicted RBP20.74■□□□□ 0.91
CCM2-218ENST00000541586 ZNF688P0C7X2 276 aa20.74■□□□□ 0.91
CCM2-218ENST00000541586 S100PP25815 95 aa20.74■□□□□ 0.91
CCM2-218ENST00000541586 SNRPD3P62318 126 aaKnown RBP20.74■□□□□ 0.91
CCM2-218ENST00000541586 CD300EQ496F6 205 aaPredicted RBP20.74■□□□□ 0.91
CCM2-218ENST00000541586 COX8CQ7Z4L0 72 aa20.74■□□□□ 0.91
CCM2-218ENST00000541586 OR10J6PQ8NGY7 276 aa20.74■□□□□ 0.91
CCM2-218ENST00000541586 IMMP2LQ96T52 175 aa20.74■□□□□ 0.91
CCM2-218ENST00000541586 CXCL1P09341 107 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 ZNF138P52744 262 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 NDFIP1Q9BT67 221 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 IL36BQ9NZH7 164 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 MGAM2Q2M2H8 2515 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 F6UB75 175 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 GATCO43716 136 aaKnown RBP20.73■□□□□ 0.91
CCM2-218ENST00000541586 IGLV1-51P01701 117 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 PSMG4Q5JS54 123 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 OR8A1Q8NGG7 326 aa20.73■□□□□ 0.91
CCM2-218ENST00000541586 DAZAP1Q96EP5 407 aaKnown RBP20.73■□□□□ 0.91
CCM2-218ENST00000541586 NPIPB6E9PJ23 425 aa20.72■□□□□ 0.91
CCM2-218ENST00000541586 CRIP1P50238 77 aa20.72■□□□□ 0.91
CCM2-218ENST00000541586 FAM3BP58499 235 aaPredicted RBP20.72■□□□□ 0.91
CCM2-218ENST00000541586 KCNIP4Q6PIL6 250 aa20.72■□□□□ 0.91
CCM2-218ENST00000541586 IZUMO1RA6ND01 250 aa20.71■□□□□ 0.91
CCM2-218ENST00000541586 CT45A10P0DMU9 189 aa20.71■□□□□ 0.91
CCM2-218ENST00000541586 PPP1R14DQ9NXH3 145 aa20.71■□□□□ 0.91
CCM2-218ENST00000541586 CA1P00915 261 aaPredicted RBP20.7■□□□□ 0.9
CCM2-218ENST00000541586 P01737 135 aa20.7■□□□□ 0.9
CCM2-218ENST00000541586 SAMD5Q5TGI4 173 aa20.7■□□□□ 0.9
CCM2-218ENST00000541586 TRAV2A0A0B4J234 112 aa20.7■□□□□ 0.9
CCM2-218ENST00000541586 HIST1H1AQ02539 215 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms