RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 F8W1H4 67 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 SPRY3O43610 288 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 IGKV1-16P04430 117 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 RAB9AP51151 201 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 NEGR1Q7Z3B1 354 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 ZNF414Q96IQ9 312 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 LINC00479Q96M42 142 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 PIMREGQ9BSJ6 248 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
CHFR-219ENST00000541341 MEGF9Q9H1U4 602 aa8.22□□□□□ -1.09
CHFR-219ENST00000541341 IGHV3OR15-7A0A075B7D8 119 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 A0A1W2PPM0 123 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 SH2D7A6NKC9 451 aaPredicted RBP8.21□□□□□ -1.1
CHFR-219ENST00000541341 LYNX1G3V0Z9 82 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 SLC25A17O43808 307 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 IGHV1-46P01743 117 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 LYNX1P0DP58 116 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 WT1-ASQ06250 92 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 OR10W1Q8NGF6 305 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.1
CHFR-219ENST00000541341 ZNF48Q96MX3 618 aaPredicted RBP8.21□□□□□ -1.1
CHFR-219ENST00000541341 PRELID3AQ96N28 172 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 BPESC1Q9GZL8 116 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 KAAG1Q9UBP8 84 aa8.21□□□□□ -1.1
CHFR-219ENST00000541341 F11RQ9Y624 299 aaKnown RBP8.21□□□□□ -1.1
CHFR-219ENST00000541341 PPIAL4EA0A075B759 164 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 A0A087X0K7 114 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 A0A1B0GV72 72 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 LINC01546A6NGU7 62 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 VWC2LB2RUY7 222 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 PPIAL4DF5H284 164 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 C3orf80F5H4A9 247 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 PPIAL4FP0DN26 164 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 LYRM7Q5U5X0 104 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 FAM104BQ5XKR9 115 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 PRNTQ86SH4 94 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 ARPC1AQ92747 370 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 IFI27L1Q96BM0 104 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 FNDC4Q9H6D8 234 aaPredicted RBP8.2□□□□□ -1.1
CHFR-219ENST00000541341 TMEM160Q9NX00 188 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 PSG8Q9UQ74 426 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 SPCS1Q9Y6A9 102 aa8.2□□□□□ -1.1
CHFR-219ENST00000541341 TRBV19A0A075B6N1 114 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 TRAV8-6A0A0B4J262 113 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 LINC01619G3V211 115 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 K7EMI3 77 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 GNG5P63218 68 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 KIR3DS1Q14943 382 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 TWIST1Q15672 202 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 C1orf229Q6ZS94 237 aaPredicted RBP8.19□□□□□ -1.1
CHFR-219ENST00000541341 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 MOB3BQ86TA1 216 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.19□□□□□ -1.1
CHFR-219ENST00000541341 LEAP2Q969E1 77 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 ST6GALNAC6Q969X2 333 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 CCL13Q99616 98 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 DYNLRB1Q9NP97 96 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 THYN1Q9P016 225 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 RPH3ALQ9UNE2 315 aa8.19□□□□□ -1.1
CHFR-219ENST00000541341 A0A1W2PPI3 338 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 H3BUT2 72 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 M0QZ24 198 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 IGLV2-23P01705 113 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
CHFR-219ENST00000541341 EVI2AP22794 236 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 MORN5Q5VZ52 161 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 ZNF841Q6ZN19 808 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 GOLT1AQ6ZVE7 132 aa8.18□□□□□ -1.1
CHFR-219ENST00000541341 ARHGAP32A7KAX9 2087 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 IGHV3-7P01780 117 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 FGF6P10767 208 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 CKS2P33552 79 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 MLANAQ16655 118 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 SAMD13Q5VXD3 122 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 BCL6BQ8N143 479 aaPredicted RBP8.17□□□□□ -1.1
CHFR-219ENST00000541341 KIR3DL3Q8N743 410 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 OR8A1Q8NGG7 326 aa8.17□□□□□ -1.1
CHFR-219ENST00000541341 TENM1Q9UKZ4 2725 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 A6NJY4 79 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 H3BRN7 92 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 WIPF1O43516 503 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 TFF1P04155 84 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 CSN3P07498 182 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 MYOD1P15172 320 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 FCER1GP30273 86 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 LYZP61626 148 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 CCL8P80075 99 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 SPRNQ5BIV9 151 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 TMEM200BQ69YZ2 307 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 ADAMTSL5Q6ZMM2 481 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 LCNL1Q6ZST4 164 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 PPP1R27Q86WC6 154 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 TM2D2Q9BX73 214 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 TMEM133Q9H2Q1 129 aa8.16□□□□□ -1.1
CHFR-219ENST00000541341 SPANXA1Q9NS26 97 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms