RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 PAIP2BQ9ULR5 123 aaKnown RBP7.92□□□□□ -1.14
CLSTN3-209ENST00000539982 RNF222A6NCQ9 220 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 H3BRN7 92 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 NXPH4O95158 308 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 IAPPP10997 89 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 DAZ2Q13117 558 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 TMUB2Q71RG4 321 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 KCNRGQ8N5I3 272 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 LRRC20Q8TCA0 184 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 RPUSD4Q96CM3 377 aaKnown RBP7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 SMIM8Q96KF7 97 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 CIB3Q96Q77 187 aaPredicted RBP7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 SHANK2-AS3Q9BTD1 123 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 BOLA1Q9Y3E2 137 aa7.91□□□□□ -1.14
CLSTN3-209ENST00000539982 TRAV9-2A0A087WT02 112 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 A0A087X0K7 114 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 PRSS46E5RG02 174 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 TSC22D2O75157 780 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 RPL12P30050 165 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 S100A11P31949 105 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 CAV2P51636 162 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 HAMPP81172 84 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 Q6ZTI0 123 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 SLC25A31Q9H0C2 315 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 ARL6Q9H0F7 186 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 LYRM2Q9NU23 88 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 PSENENQ9NZ42 101 aa7.9□□□□□ -1.14
CLSTN3-209ENST00000539982 KANTRA0A1W2PQU2 76 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 IGSF23A1L1A6 192 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 FAM24AA6NFZ4 105 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 BCL2L11O43521 198 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 HYPMO75409 117 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 PRB4P10163 310 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 RPP30P78346 268 aaKnown RBP7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 OPCMLQ14982 345 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 SERTAD4-AS1Q5TG53 156 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 GFI1BQ5VTD9 330 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 TMEM252Q8N6L7 170 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 TMEM70Q9BUB7 260 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 HIGD1AQ9Y241 93 aa7.89□□□□□ -1.15
CLSTN3-209ENST00000539982 TRGV2A0A075B6R0 118 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 H3BP45 60 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 TAAR5O14804 337 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 PLP1P60201 277 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 AKR1C1Q04828 323 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 BAXQ07812 192 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 SPANXN5Q5MJ07 72 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 LYPD5Q6UWN5 251 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 STX12Q86Y82 276 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 PARD6GQ9BYG4 376 aaPredicted RBP7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 MSRB1Q9NZV6 116 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 STRAPQ9Y3F4 350 aaKnown RBP7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 ICOSQ9Y6W8 199 aa7.88□□□□□ -1.15
CLSTN3-209ENST00000539982 K7EP13 123 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 PAX4O43316 350 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 ZNF324O75467 553 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 OR5G3P0C626 314 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 SULT1A1P50225 295 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 NHLH2Q02577 135 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 CYP2G1PQ6ZSU1 146 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 S100A7AQ86SG5 101 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 PYGO2Q9BRQ0 406 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 ZNF331Q9NQX6 463 aaPredicted RBP7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 LY96Q9Y6Y9 160 aa7.87□□□□□ -1.15
CLSTN3-209ENST00000539982 IGLV5-52A0A0A0MRZ9 124 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 TRAV12-3A0A0B4J271 114 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 PMS2P5A8MQ11 134 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 MRPS12O15235 138 aaKnown RBP7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 CST7O76096 145 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 METTL15P1P0C7V9 234 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 TMEM14EPQ6UXP3 125 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 SLC51BQ86UW2 128 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 SYT8Q8NBV8 401 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 RNF24Q9Y225 148 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 FUT9Q9Y231 359 aa7.86□□□□□ -1.15
CLSTN3-209ENST00000539982 PRAC2D3DTV9 90 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 LINC00869P0C866 280 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 SELENOTP62341 195 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 HBG1P69891 147 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 HBG2P69892 147 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 LCN15Q6UWW0 184 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 NTN5Q8WTR8 489 aaPredicted RBP7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 LINC00467Q9BRT7 94 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 SLC50A1Q9BRV3 221 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 ZNF471Q9BX82 626 aaPredicted RBP7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 SMIM3Q9BZL3 60 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 GSN-AS1Q9NRJ2 163 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 CYTL1Q9NRR1 136 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 HMCN2Q8NDA2 5059 aa7.85□□□□□ -1.15
CLSTN3-209ENST00000539982 TRGV1A0A0A0MS02 117 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 BORCS7-ASMTA0A0B4J1R7 106 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 J3KRW8 73 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 CT45A10P0DMU9 189 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 EVI2AP22794 236 aa7.84□□□□□ -1.15
CLSTN3-209ENST00000539982 LEPP41159 167 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms