RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 E5RGE8 158 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 SSNA1O43805 119 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 PTTG1O95997 202 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 BAXQ07812 192 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 DAZ2Q13117 558 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 ATP6V1FQ16864 119 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 ESRGQ1W209 222 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 MRPL53Q96EL3 112 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 UPK3BQ9BT76 320 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 Q9H3A6 140 aa13.64□□□□□ -0.23
TNFRSF1B-204ENST00000536782 TRBV19A0A075B6N1 114 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 UBE2L5PA0A1B0GUS4 154 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 SLC25A5P05141 298 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 H2BFSP57053 126 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 Q6ZTI0 123 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 KRTAP1-5Q9BYS1 174 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 SLC25A31Q9H0C2 315 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 TMPRSS5Q9H3S3 457 aa13.63□□□□□ -0.23
TNFRSF1B-204ENST00000536782 ZNF680Q8NEM1 530 aa13.62□□□□□ -0.23
TNFRSF1B-204ENST00000536782 CHAC2Q8WUX2 184 aa13.62□□□□□ -0.23
TNFRSF1B-204ENST00000536782 TMEM14CQ9P0S9 112 aa13.62□□□□□ -0.23
TNFRSF1B-204ENST00000536782 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1B-204ENST00000536782 DNAH5Q8TE73 4624 aa13.62□□□□□ -0.23
TNFRSF1B-204ENST00000536782 A0A1W2PPQ1 181 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 C7orf71A4D174 169 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 M0R3E3 92 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 PET100P0DJ07 73 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 ERCC8Q13216 396 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 LRRC37A5PQ49AS3 106 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 SPATA12Q7Z6I5 190 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 MAPKAPK5-AS1Q8N8E1 139 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 GSN-AS1Q9NRJ2 163 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 PRELID1Q9Y255 219 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 TIMM9Q9Y5J7 89 aa13.61□□□□□ -0.23
TNFRSF1B-204ENST00000536782 TRGV2A0A075B6R0 118 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 H0YIZ8 118 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 MPDU1O75352 247 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 HIST1H1EP10412 219 aaKnown RBP13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 FGF7P21781 194 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 PDE6HQ13956 83 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 LINC00477Q96M19 166 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 OR5AC2Q9NZP5 309 aa13.6□□□□□ -0.23
TNFRSF1B-204ENST00000536782 KLLNB2CW77 178 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 NDUFB4O95168 129 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 C11orf72Q8NBR9 251 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 FAM19A4Q96LR4 140 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 C18orf15Q96N68 181 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 LINC00467Q9BRT7 94 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 AGPAT4-IT1Q9H0P7 198 aa13.59□□□□□ -0.23
TNFRSF1B-204ENST00000536782 ZNF324O75467 553 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 PYYP10082 97 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 BTF3P20290 206 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 CD300CQ08708 224 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 BTN1A1Q13410 526 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 ANXA2RQ3ZCQ2 193 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 OR5C1Q8NGR4 320 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 BLNKQ8WV28 456 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 VSIG2Q96IQ7 327 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 AAMDCQ9H7C9 122 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
TNFRSF1B-204ENST00000536782 A0A096LPF7 62 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 TRGV1A0A0A0MS02 117 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 MPC2O95563 127 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 GPX1P07203 203 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 RNASE4P34096 147 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 NHLH2Q02577 135 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 EXOC3-AS1Q8N2X6 119 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 FUT9Q9Y231 359 aa13.57□□□□□ -0.24
TNFRSF1B-204ENST00000536782 C9orf47Q6ZRZ4 202 aa13.56□□□□□ -0.24
TNFRSF1B-204ENST00000536782 NPCDR1Q9BY65 106 aa13.56□□□□□ -0.24
TNFRSF1B-204ENST00000536782 NMBP08949 121 aa13.55□□□□□ -0.24
TNFRSF1B-204ENST00000536782 CRISP2P16562 243 aa13.55□□□□□ -0.24
TNFRSF1B-204ENST00000536782 ICAM4Q14773 271 aa13.55□□□□□ -0.24
TNFRSF1B-204ENST00000536782 GCSAMLQ5JQS6 135 aa13.55□□□□□ -0.24
TNFRSF1B-204ENST00000536782 KLF12Q9Y4X4 402 aa13.55□□□□□ -0.24
TNFRSF1B-204ENST00000536782 SPINK4O60575 86 aa13.54□□□□□ -0.24
TNFRSF1B-204ENST00000536782 TCL1AP56279 114 aa13.54□□□□□ -0.24
TNFRSF1B-204ENST00000536782 IBA57Q5T440 356 aaKnown RBP13.54□□□□□ -0.24
TNFRSF1B-204ENST00000536782 TMEM78Q5T7P6 136 aa13.54□□□□□ -0.24
TNFRSF1B-204ENST00000536782 SLC25A2Q9BXI2 301 aa13.54□□□□□ -0.24
TNFRSF1B-204ENST00000536782 KCNIP2Q9NS61 270 aa13.54□□□□□ -0.24
TNFRSF1B-204ENST00000536782 IGKV2-40A0A087WW87 121 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 RGS13O14921 159 aa13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 IGKV2D-40P01614 121 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 KRTAP10-2P60368 255 aa13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 FAM122CQ6P4D5 195 aa13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 Q8N1X5 172 aa13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 MBD2Q9UBB5 411 aa13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 HSPB11Q9Y547 144 aa13.53□□□□□ -0.24
TNFRSF1B-204ENST00000536782 SIVA1O15304 175 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 NBEAP1P0C6P0 100 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 LINC00315P59091 139 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 MIR17HGQ75NE6 70 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ZFAND2AQ8N6M9 145 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 THAP6Q8TBB0 222 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ST6GAL2Q96JF0 529 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 FAM167A-AS1Q96KT0 104 aa13.52□□□□□ -0.25
TNFRSF1B-204ENST00000536782 ATP5SQ99766 215 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms