RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 FAM25AB3EWG3 89 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 FAM25CB3EWG5 89 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 FAM25GB3EWG6 89 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 PRAC2D3DTV9 90 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 F8W036 122 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 MPDU1O75352 247 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 ARL6IP5O75915 188 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 OR10J4P0C629 311 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 CRYGAP11844 174 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 RPL7P18124 248 aaKnown RBP4.49□□□□□ -1.69
CPSF7-214ENST00000535222 CXCL2P19875 107 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 GPX4P36969 197 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-214ENST00000535222 Q0VG73 95 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 C21orf62-AS1Q17RA5 79 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 DNAL1Q4LDG9 190 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 GGNBP1Q5YKI7 109 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 TBC1D26Q86UD7 250 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 CLRN3Q8NCR9 226 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 BPIFCQ8NFQ6 507 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 CHAC2Q8WUX2 184 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 LINC00479Q96M42 142 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 CCDC90BQ9GZT6 254 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 OR51M1Q9H341 326 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 ZNF331Q9NQX6 463 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-214ENST00000535222 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
CPSF7-214ENST00000535222 TRBV6-4A0A1B0GX49 114 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 H3BRN7 92 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 MRPS12O15235 138 aaKnown RBP4.48□□□□□ -1.69
CPSF7-214ENST00000535222 SCGNO76038 276 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 NMBP08949 121 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 S100A7P31151 101 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 RPP30P78346 268 aaKnown RBP4.48□□□□□ -1.69
CPSF7-214ENST00000535222 SLC25A29Q8N8R3 303 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 UBE2WQ96B02 151 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 ZNF486Q96H40 463 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-214ENST00000535222 ZNF2Q9BSG1 426 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-214ENST00000535222 CHCHD7Q9BUK0 85 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 HEYLQ9NQ87 328 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-214ENST00000535222 RSL24D1Q9UHA3 163 aaKnown RBP4.48□□□□□ -1.69
CPSF7-214ENST00000535222 KLK12Q9UKR0 248 aa4.48□□□□□ -1.69
CPSF7-214ENST00000535222 MUC21A0A0G2JKD1 596 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 A0A0G2JRQ6 117 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 SLPIP03973 132 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 LINC00694P0DN24 101 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 NKX2-5P52952 324 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-214ENST00000535222 FLI1Q01543 452 aaPredicted RBP4.47□□□□□ -1.69
CPSF7-214ENST00000535222 IFITM2Q01629 132 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 ELOBQ15370 118 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 GUK1Q16774 197 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 KRTAP19-2Q3LHN2 52 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 ENHOQ6UWT2 76 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 TMEM75Q8N9X5 138 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 OR4C5Q8NGB2 326 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 PYDC1Q8WXC3 89 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 SPXQ9BT56 116 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 SHANK2-AS3Q9BTD1 123 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 FXYD6Q9H0Q3 95 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 U3KQ87 197 aa4.47□□□□□ -1.69
CPSF7-214ENST00000535222 A0A087WWC5 75 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 RAB19A4D1S5 217 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 MYL12BO14950 172 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 CRISP2P16562 243 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 ATP5IP56385 69 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-214ENST00000535222 ID3Q02535 119 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 OPCMLQ14982 345 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 RHOHQ15669 191 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 LBHQ53QV2 105 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-214ENST00000535222 FAM162BQ5T6X4 162 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 GPR107Q5VW38 600 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 LPCAT3Q6P1A2 487 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 KRTAP26-1Q6PEX3 210 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 ACOT7LQ6ZUV0 252 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 LGI3Q8N145 548 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 SLC50A1Q9BRV3 221 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 C1orf43Q9BWL3 253 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 CDIP1Q9H305 208 aa4.46□□□□□ -1.7
CPSF7-214ENST00000535222 LSM2Q9Y333 95 aaKnown RBP4.46□□□□□ -1.7
CPSF7-214ENST00000535222 TRAV1-2A0A0B4J238 106 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 LOC100506127A0A0U1RQW1 187 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 CRYM-AS1A6NIL9 109 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 GABARAPH6UMI1 98 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 GABARAPO95166 117 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 RAB3DO95716 219 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 TCRBP04435 133 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 KRTAP1-4P0C5Y4 121 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 S100GP29377 79 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 RCVRNP35243 200 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 UCP3P55916 312 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 BTN1A1Q13410 526 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 TRAM1Q15629 374 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 ASB16-AS1Q495Z4 193 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 PHLDA2Q53GA4 152 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 PXDC1Q5TGL8 231 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 TMEM182Q6ZP80 229 aaPredicted RBP4.45□□□□□ -1.7
CPSF7-214ENST00000535222 INO80EQ8NBZ0 244 aaPredicted RBP4.45□□□□□ -1.7
CPSF7-214ENST00000535222 OR4D10Q8NGI6 311 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 OR52I2Q8NH67 350 aa4.45□□□□□ -1.7
CPSF7-214ENST00000535222 SEC22CQ9BRL7 303 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms