RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	DIAPH2-AS1	Q14236	149 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	GATD1	Q8NB37	220 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ZNF134	P52741	427 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	CUL9	Q8IWT3	2517 aa		12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532	C1orf147	Q96MC9	270 aa	Predicted RBP	12.51	□□□□□ -0.41
NCAPD3-213	ENST00000534532		H3BRN7	92 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	AMN1	Q8IY45	258 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ERG28	Q9UKR5	140 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	GBF1	Q92538	1859 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TECTA	O75443	2155 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TRAV12-2	A0A075B6T6	113 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	INS-IGF2	F8WCM5	200 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	IGHV4-38-2	P0DP08	117 aa		12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SRSF4	Q08170	494 aa	Known RBP	12.5	□□□□□ -0.41
NCAPD3-213	ENST00000534532	CGB7	P0DN87	165 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	NRGN	Q92686	78 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TMEM243	Q9BU79	118 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TIMM21	Q9BVV7	248 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ZNF492	Q9P255	531 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	DLX4	Q92988	240 aa	Predicted RBP	12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TMEM14C	Q9P0S9	112 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TSC2	P49815	1807 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	FOXI2	Q6ZQN5	318 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ZNRF2	Q8NHG8	242 aa		12.49	□□□□□ -0.41
NCAPD3-213	ENST00000534532	LEPROT	O15243	131 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SFTA2	Q6UW10	78 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	NOTCH4	Q99466	2003 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	LYL1	P12980	280 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ATXN8	Q156A1	80 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ATRAID	Q6UW56	229 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	LINC00479	Q96M42	142 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532		I3L3M4	83 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	DOCK9	Q9BZ29	2069 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	NPC2	P61916	151 aa		12.48	□□□□□ -0.41
NCAPD3-213	ENST00000534532	GP9	P14770	177 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SPRY4	Q9C004	299 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TP53BP1	Q12888	1972 aa	Predicted RBP	12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	POU2AF1	Q16633	256 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SMKR1	H3BMG3	65 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	IGLC1	P0CG04	106 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TMEM95	Q3KNT9	176 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ANXA2R	Q3ZCQ2	193 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	ANAPC10	Q9UM13	185 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TNFRSF6B	O95407	300 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	IGF2BP2-AS1	Q96M15	143 aa		12.47	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BK	O60814	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BJ	P06899	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BO	P23527	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BB	P33778	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BD	P58876	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BC	P62807	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST2H2BE	Q16778	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BH	Q93079	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BN	Q99877	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	HIST1H2BM	Q99879	126 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	SPAG8	Q99932	426 aa	Predicted RBP	12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	PRORY	Q9H606	182 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	LAMTOR3	Q9UHA4	124 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TEX48	A0A1B0GUV7	120 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	FAM231B	A6NCW3	169 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532		H3BUT2	72 aa		12.46	□□□□□ -0.41
NCAPD3-213	ENST00000534532	TMEM256	Q8N2U0	113 aa		12.46	□□□□□ -0.42
NCAPD3-213	ENST00000534532	C8orf49	Q96NF6	230 aa		12.46	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PRR25	Q96S07	402 aa		12.46	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PRR31	Q5SQ13	230 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	IGLV3-1	P01715	115 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	DEFB136	Q30KP8	78 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	FBXL19-AS1	Q494R0	122 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	LURAP1L	Q8IV03	231 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	NKAPP1	Q8N9T2	125 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532		A0A1W2PNU3	283 aa	Predicted RBP	12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PRSS46	E5RG02	174 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	C11orf53	Q8IXP5	236 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ORAOV1	Q8WV07	137 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	RNF138	Q8WVD3	245 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	NLRC5	Q86WI3	1866 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	HSD52	Q0P140	79 aa		12.45	□□□□□ -0.42
NCAPD3-213	ENST00000534532	LHB	P01229	141 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	GAGE6	Q13070	117 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PIFO	Q8TCI5	191 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ATRX	P46100	2492 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	LINC00518	Q8N0U6	118 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	HIVEP2	P31629	2446 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	THAP8	Q8NA92	274 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	IGKV1-39	P01597	117 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	IGKV1D-39	P04432	117 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	CT83	Q5H943	113 aa		12.44	□□□□□ -0.42
NCAPD3-213	ENST00000534532	RHOH	Q15669	191 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	SRSF2	Q01130	221 aa	Known RBP	12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	OVOL2	Q9BRP0	275 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	CACNA1A	O00555	2505 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	TRAV8-2	A0A0B4J237	113 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	TP53TG1	Q9Y2A0	90 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PTPRD	P23468	1912 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	ANAPC1	Q9H1A4	1944 aa		12.43	□□□□□ -0.42
NCAPD3-213	ENST00000534532	OTOGL	Q3ZCN5	2332 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	TMEM141	Q96I45	108 aa		12.42	□□□□□ -0.42
NCAPD3-213	ENST00000534532	PRO3102	Q9H379	93 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms