RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CDPF1Q6NVV7 123 aa14.57□□□□□ -0.08
SSH3-211ENST00000534112 ZNF680Q8NEM1 530 aa14.57□□□□□ -0.08
SSH3-211ENST00000534112 FUT9Q9Y231 359 aa14.57□□□□□ -0.08
SSH3-211ENST00000534112 RCL1Q9Y2P8 373 aaKnown RBP14.57□□□□□ -0.08
SSH3-211ENST00000534112 TNFRSF18Q9Y5U5 241 aa14.57□□□□□ -0.08
SSH3-211ENST00000534112 MYCBP2O75592 4640 aa14.56□□□□□ -0.08
SSH3-211ENST00000534112 TRAV5A0A0B4J249 113 aa14.56□□□□□ -0.08
SSH3-211ENST00000534112 SLC25A5P05141 298 aaKnown RBP14.56□□□□□ -0.08
SSH3-211ENST00000534112 C2orf50Q96LR7 162 aa14.56□□□□□ -0.08
SSH3-211ENST00000534112 C7orf71A4D174 169 aa14.55□□□□□ -0.08
SSH3-211ENST00000534112 ZNF324O75467 553 aaPredicted RBP14.55□□□□□ -0.08
SSH3-211ENST00000534112 MBPP02686 304 aaPredicted RBP14.55□□□□□ -0.08
SSH3-211ENST00000534112 C7orf66A4D0T2 115 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 PAX4O43316 350 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 CAMLGP49069 296 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 ERCC8Q13216 396 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 ANXA2RQ3ZCQ2 193 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 Q5VSD8 79 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 Q6ZRG5 221 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 LINC00467Q9BRT7 94 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 KLF12Q9Y4X4 402 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 ICOSQ9Y6W8 199 aa14.54□□□□□ -0.08
SSH3-211ENST00000534112 VPS13BQ7Z7G8 4022 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 KLLNB2CW77 178 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 SPINK4O60575 86 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 KRTAP10-1P60331 282 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 CD300CQ08708 224 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 IL15RAQ13261 267 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 RAB31Q13636 194 aa14.53□□□□□ -0.08
SSH3-211ENST00000534112 EIF4E3Q8N5X7 224 aaKnown RBP14.53□□□□□ -0.08
SSH3-211ENST00000534112 M0R3E3 92 aa14.52□□□□□ -0.09
SSH3-211ENST00000534112 ZNF253O75346 499 aa14.52□□□□□ -0.09
SSH3-211ENST00000534112 MIC13Q5XKP0 118 aa14.52□□□□□ -0.09
SSH3-211ENST00000534112 NFE4Q86UQ8 179 aa14.52□□□□□ -0.09
SSH3-211ENST00000534112 FRZBQ92765 325 aa14.52□□□□□ -0.09
SSH3-211ENST00000534112 MRPL53Q96EL3 112 aaKnown RBP14.52□□□□□ -0.09
SSH3-211ENST00000534112 ST6GAL2Q96JF0 529 aa14.52□□□□□ -0.09
SSH3-211ENST00000534112 A0A087WTM6 91 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 IFNA5P01569 189 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 IGHV3-53P01767 116 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 DNAH10OSP0CZ25 163 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 RNASE4P34096 147 aaKnown RBP14.51□□□□□ -0.09
SSH3-211ENST00000534112 TCL1AP56279 114 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 BTN1A1Q13410 526 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 RGS21Q2M5E4 152 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 LYPD5Q6UWN5 251 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 OR1L4Q8NGR5 311 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 FAM19A4Q96LR4 140 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 LINC00477Q96M19 166 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 AGPAT4-IT1Q9H0P7 198 aa14.51□□□□□ -0.09
SSH3-211ENST00000534112 LSM5Q9Y4Y9 91 aaKnown RBP14.51□□□□□ -0.09
SSH3-211ENST00000534112 FLG2Q5D862 2391 aaPredicted RBP14.5□□□□□ -0.09
SSH3-211ENST00000534112 TRBV19A0A075B6N1 114 aa14.5□□□□□ -0.09
SSH3-211ENST00000534112 SSNA1O43805 119 aa14.5□□□□□ -0.09
SSH3-211ENST00000534112 SIX6O95475 246 aa14.5□□□□□ -0.09
SSH3-211ENST00000534112 C11orf1Q9H5F2 150 aa14.5□□□□□ -0.09
SSH3-211ENST00000534112 PRO0255Q9UI72 69 aa14.5□□□□□ -0.09
SSH3-211ENST00000534112 ALG5Q9Y673 324 aa14.5□□□□□ -0.09
SSH3-211ENST00000534112 MPDU1O75352 247 aa14.49□□□□□ -0.09
SSH3-211ENST00000534112 RAB32Q13637 225 aa14.49□□□□□ -0.09
SSH3-211ENST00000534112 SRRM2Q9UQ35 2752 aaKnown RBP14.48□□□□□ -0.09
SSH3-211ENST00000534112 TRAV9-2A0A087WT02 112 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 L7N2F9 121 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 NDUFB4O95168 129 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 CRYBA4P53673 196 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 S100A10P60903 97 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 VAMP2P63027 116 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 SLAQ13239 276 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 MRPL23Q16540 153 aaKnown RBP14.48□□□□□ -0.09
SSH3-211ENST00000534112 IBA57Q5T440 356 aaKnown RBP14.48□□□□□ -0.09
SSH3-211ENST00000534112 PFDN5Q99471 154 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 NMES1Q9C002 83 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 TP53TG3Q9ULZ0 132 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 HHLA3Q9XRX5 114 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 WDR83OSQ9Y284 106 aa14.48□□□□□ -0.09
SSH3-211ENST00000534112 CST7O76096 145 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 GPX1P07203 203 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 CRISP2P16562 243 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 H2BFSP57053 126 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 C8orf49Q96NF6 230 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 SLC39A9Q9NUM3 307 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 UQCC1Q9NVA1 299 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 MRPL16Q9NX20 251 aaKnown RBP14.47□□□□□ -0.09
SSH3-211ENST00000534112 PRELID1Q9Y255 219 aa14.47□□□□□ -0.09
SSH3-211ENST00000534112 SMR3BP02814 79 aaPredicted RBP14.46□□□□□ -0.09
SSH3-211ENST00000534112 HIST1H1EP10412 219 aaKnown RBP14.46□□□□□ -0.09
SSH3-211ENST00000534112 RPL29P47914 159 aaKnown RBP14.46□□□□□ -0.09
SSH3-211ENST00000534112 BCAP31P51572 246 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 FHL2Q14192 279 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 ICAM4Q14773 271 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 NEGR1Q7Z3B1 354 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 VGLL1Q99990 258 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 TMEM14CQ9P0S9 112 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 LY96Q9Y6Y9 160 aa14.46□□□□□ -0.09
SSH3-211ENST00000534112 RGS13O14921 159 aa14.45□□□□□ -0.1
SSH3-211ENST00000534112 NMBP08949 121 aa14.45□□□□□ -0.1
SSH3-211ENST00000534112 PVALBP20472 110 aaPredicted RBP14.45□□□□□ -0.1
SSH3-211ENST00000534112 CAV2P51636 162 aa14.45□□□□□ -0.1
SSH3-211ENST00000534112 CYCSP99999 105 aaKnown RBP14.45□□□□□ -0.1
SSH3-211ENST00000534112 Q6ZQT7 251 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms