RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GPX1P07203 203 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 SEC11BP0C7V7 166 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 PRB4P10163 310 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 HTN1P15515 57 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 PPT1P50897 306 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF138P52744 262 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 TAS2R60P59551 318 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 ERCC8Q13216 396 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 DPPA3Q6W0C5 159 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 C9orf47Q6ZRZ4 202 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 ARL6IP6Q8N6S5 226 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 C5orf17Q8NAS9 161 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR11H4Q8NGC9 324 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 FAM213BQ8TBF2 198 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF503Q96F45 646 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 C16orf74Q96GX8 76 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 ST6GAL2Q96JF0 529 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 NKX6-2Q9C056 277 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 MAP1LC3BQ9GZQ8 125 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 CYTL1Q9NRR1 136 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 X6R8D5 127 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 DNAH3Q8TD57 4116 aa3.91□□□□□ -1.78
HMGB1P40-201ENST00000525121 TRAV10A0A0B4J240 114 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRAV12-3A0A0B4J271 114 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 TRBV7-9A0A0J9YWB2 115 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 A0A1W2PRE2 83 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 C7orf71A4D174 169 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 FBLL1A6NHQ2 334 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF705GA8MUZ8 300 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 DIRC3C9JPN6 131 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 F6UZH7 168 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 RGS13O14921 159 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 NMBP08949 121 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 RBMY1A1P0DJD3 496 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 RBMY1CP0DJD4 496 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 CT45A10P0DMU9 189 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 RNASE4P34096 147 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 RAB5CP51148 216 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 RBMY1FQ15415 496 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 GFI1BQ5VTD9 330 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF493Q6ZR52 646 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 GOLT1AQ6ZVE7 132 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 C1orf158Q8N1D5 194 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF680Q8NEM1 530 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 TMEM263Q8WUH6 116 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 TMED6Q8WW62 240 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 PYGO2Q9BRQ0 406 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 AGPAT4-IT1Q9H0P7 198 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 YTHDF2Q9Y5A9 579 aaKnown RBP3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 LENEPQ9Y5L5 61 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 TGP01266 2768 aa3.9□□□□□ -1.79
HMGB1P40-201ENST00000525121 CBY3A6NI87 242 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 LYRM9A8MSI8 78 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 SNURFLB1AK76 121 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 CRXO43186 299 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 H2AFB1P0C5Y9 115 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 CRISP2P16562 243 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 FGF8P55075 233 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 UBE2G2P60604 165 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 DAD1P61803 113 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 SUMO1P63165 101 aaKnown RBP3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 BTN1A1Q13410 526 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 LGALSLQ3ZCW2 172 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM222AQ5U5X8 452 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 CST9LP1Q5W188 147 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 SLC51BQ86UW2 128 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 CYB561D1Q8N8Q1 229 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 Q8TAT8 98 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 C2CD4CQ8TF44 421 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 SFT2D1Q8WV19 159 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 VGLL1Q99990 258 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 TCEAL7Q9BRU2 100 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 ATG101Q9BSB4 218 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 TREM1Q9NP99 234 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF492Q9P255 531 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 EPDR1Q9UM22 224 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 TIMM8BQ9Y5J9 83 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 ARL2-SNX15V9GYD0 113 aa3.89□□□□□ -1.79
HMGB1P40-201ENST00000525121 DEFB131BA0A096LNP1 70 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 A0A1B0GV50 99 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 KLLNB2CW77 178 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 GGTLC3B5MD39 225 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 IFNA1P01562 189 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 TCRAP04437 139 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 HTN3P15516 51 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 TCTAP57738 103 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 UBE2G1P62253 170 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 GNG5P63218 68 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF415Q09FC8 603 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 ZNF726P1Q15940 193 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 SAPCD1Q5SSQ6 148 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 FAM159AQ6UWV7 190 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 Q6ZTC4 211 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 SSX7Q7RTT5 188 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 TMEM75Q8N9X5 138 aa3.88□□□□□ -1.79
HMGB1P40-201ENST00000525121 SUN5Q8TC36 379 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms