RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 NOTCH2NLQ7Z3S9 236 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 Q8N2B8 174 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 C11orf72Q8NBR9 251 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 NUP37Q8NFH4 326 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 RFESDQ8TAC1 157 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 IFI27L1Q96BM0 104 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 GPHA2Q96T91 129 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 OPRPNQ99935 248 aaPredicted RBP4.98□□□□□ -1.61
SDC2-208ENST00000523877 Q9H3A6 140 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 C19orf73Q9NVV2 129 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 TP73-AS1Q9UF72 201 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 V9GY05 133 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 COL4A5P29400 1685 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 PCSK5Q92824 1860 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 EYSQ5T1H1 3165 aa4.98□□□□□ -1.61
SDC2-208ENST00000523877 PIEZO1Q92508 2521 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 CPAMD8Q8IZJ3 1885 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 TRBV5-3A0A0A0MS03 114 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 IGKV1D-43A0A0B4J1Z2 117 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 FSTL3O95633 263 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 CCKP06307 115 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 RNASE2P10153 161 aaKnown RBP4.97□□□□□ -1.61
SDC2-208ENST00000523877 UBE2AP49459 152 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 ZNF136P52737 540 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 FBXL19-AS1Q494R0 122 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 GUSBP11Q6P575 273 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 MAPKAPK5-AS1Q8N8E1 139 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 RNF185Q96GF1 192 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 TTC28Q96AY4 2481 aa4.97□□□□□ -1.61
SDC2-208ENST00000523877 SSC5DA1L4H1 1573 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 COL2A1P02458 1487 aaPredicted RBP4.96□□□□□ -1.62
SDC2-208ENST00000523877 PIGBOS1A0A0B4J2F0 54 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 IBA57-AS1B1ANH7 110 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 H3BVH4 76 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 NXPH3O95157 252 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 IGKV1-5P01602 117 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 SLC25A16P16260 332 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 PEBP1P30086 187 aaKnown RBP4.96□□□□□ -1.62
SDC2-208ENST00000523877 LINC00313P59037 77 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 PRR3P79522 188 aaKnown RBP4.96□□□□□ -1.62
SDC2-208ENST00000523877 C6orf99Q4VX62 202 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 LINC00337Q8N6G1 96 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 CD177Q8N6Q3 437 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 ZNF714Q96N38 554 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 A0A0G2JMZ2 1700 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 LRRC37A2A6NM11 1700 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 LRRC37AA6NMS7 1700 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 LAMA2P24043 3122 aaKnown RBP4.96□□□□□ -1.62
SDC2-208ENST00000523877 CEP290O15078 2479 aa4.96□□□□□ -1.62
SDC2-208ENST00000523877 ZNF236Q9UL36 1845 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 DOCK8Q8NF50 2099 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 A0A1B0GWA3 101 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 EPOPA6NHQ4 379 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 COX7A2P2O60397 106 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 INAFM2P0DMQ5 153 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 FUSP35637 526 aaKnown RBP eCLIP4.95□□□□□ -1.62
SDC2-208ENST00000523877 FOLR3P41439 243 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 SERF2P84101 59 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 RBM3P98179 157 aaKnown RBP4.95□□□□□ -1.62
SDC2-208ENST00000523877 CIRBPQ14011 172 aaKnown RBP4.95□□□□□ -1.62
SDC2-208ENST00000523877 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 CLLU1OSQ5K130 101 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 CEMP1Q6PRD7 247 aaPredicted RBP4.95□□□□□ -1.62
SDC2-208ENST00000523877 FOXL2NBQ6ZUU3 175 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 SLC25A29Q8N8R3 303 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 TMEM190Q8WZ59 177 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 TAS2R4Q9NYW5 299 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 DLG5Q8TDM6 1919 aa4.95□□□□□ -1.62
SDC2-208ENST00000523877 A0A0J9YXV3 536 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 A0A1W2PQD3 144 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 C12orf77C9JDV5 145 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 NCBP2P52298 156 aaKnown RBP eCLIP4.94□□□□□ -1.62
SDC2-208ENST00000523877 MORN5Q5VZ52 161 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 MARCH3Q86UD3 253 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 GGNQ86UU5 652 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 SLC50A1Q9BRV3 221 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 NPCDR1Q9BY65 106 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 PLXNA1Q9UIW2 1896 aa4.94□□□□□ -1.62
SDC2-208ENST00000523877 TRAV3A0A0B4J244 114 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 A0A0B4J2C4 111 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 LOC107984156A0A0G2JMH3 177 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 LINC00473A8K010 186 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 BUB1B-PAK6H3BSN5 160 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 PPYP01298 95 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 MGST1P10620 155 aaKnown RBP4.93□□□□□ -1.62
SDC2-208ENST00000523877 MFAP2P55001 183 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 BLCAPP62952 87 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 IL17AQ16552 155 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 MDP1Q86V88 176 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 ARL17AQ8IVW1 177 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.93□□□□□ -1.62
SDC2-208ENST00000523877 DIRC1Q969H9 104 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 KRTAP4-2Q9BYR5 136 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 KLK13Q9UKR3 277 aa4.93□□□□□ -1.62
SDC2-208ENST00000523877 KIAA0100Q14667 2235 aaKnown RBP4.92□□□□□ -1.62
SDC2-208ENST00000523877 PTPRDP23468 1912 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 IGHV1-69DA0A0B4J2H0 117 aa4.92□□□□□ -1.62
SDC2-208ENST00000523877 TRBV10-2A0A0K0K1G8 114 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms