RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 DAZ3Q9NR90 486 aaKnown RBP5.94□□□□□ -1.46
HDAC3-216ENST00000523088 SLC39A9Q9NUM3 307 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 RNF114Q9Y508 228 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 X6R8D5 127 aa5.94□□□□□ -1.46
HDAC3-216ENST00000523088 MAP1AP78559 2803 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-216ENST00000523088 HEATR1Q9H583 2144 aaKnown RBP5.93□□□□□ -1.46
HDAC3-216ENST00000523088 RBAKDNA6NC62 111 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 FAM181BA6NEQ2 426 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 C2orf70A6NJV1 201 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 C17orf51A8MQB3 221 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 A8MWV9 139 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 IGLL5B9A064 214 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 SPRY2O43597 315 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 NDUFB2O95178 105 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 GYPBP06028 91 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 COL8A2P25067 703 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 HERV-K104P61576 105 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 ZAR1Q86SH2 424 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 AMN1Q8IY45 258 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 CEND1Q8N111 149 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 LINC01561Q8N1V8 128 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 ZNF645Q8N7E2 425 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 LINC00482Q8N8I6 264 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 THAP8Q8NA92 274 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 OR52N5Q8NH56 324 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 ZNF563Q8TA94 476 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 TSKUQ8WUA8 353 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 FAM19A4Q96LR4 140 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 GFI1Q99684 422 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 TMEM204Q9BSN7 226 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 LIME1Q9H400 295 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 KCNE3Q9Y6H6 103 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 PLCE1Q9P212 2302 aa5.93□□□□□ -1.46
HDAC3-216ENST00000523088 ABCA2Q9BZC7 2435 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 IGKV3D-15A0A087WSY6 115 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 SMKR1H3BMG3 65 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 K7EMT4 169 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 ATOX1O00244 68 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 PDCD6O75340 191 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 CD55P08174 381 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 CTLA4P16410 223 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 COX5AP20674 150 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 CXCL5P42830 114 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 APOC4P55056 127 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 SMIM11AP58511 58 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 PHLDA2Q53GA4 152 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 SPANXN4Q5MJ08 99 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 Q6P435 159 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 TRAPPC6BQ86SZ2 158 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 NFE4Q86UQ8 179 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 CLECL1Q8IZS7 167 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 OR5AS1Q8N127 324 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 ZCCHC24Q8N2G6 241 aaKnown RBP5.92□□□□□ -1.46
HDAC3-216ENST00000523088 POM121L12Q8N7R1 296 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 DLX4Q92988 240 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-216ENST00000523088 NABP1Q96AH0 204 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 IGF2BP2-AS1Q96M15 143 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 SMIM7Q9BQ49 75 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 DCTN5Q9BTE1 182 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 FAM103A1Q9BTL3 118 aaKnown RBP5.92□□□□□ -1.46
HDAC3-216ENST00000523088 PARP12Q9H0J9 701 aaKnown RBP5.92□□□□□ -1.46
HDAC3-216ENST00000523088 C16orf95Q9H693 158 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 ZNF665Q9H7R5 613 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 GNB4Q9HAV0 340 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 OTORQ9NRC9 128 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 AMMECR1Q9Y4X0 333 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-216ENST00000523088 CADP27708 2225 aa5.92□□□□□ -1.46
HDAC3-216ENST00000523088 HIVEP2P31629 2446 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 IGHV1-24A0A0C4DH33 117 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 A6NIN4 97 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 H3BT86 120 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 CST7O76096 145 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 CPSF4O95639 269 aaKnown RBP5.91□□□□□ -1.46
HDAC3-216ENST00000523088 SCGB1C2P0DMR2 95 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 RPS11P62280 158 aaKnown RBP eCLIP5.91□□□□□ -1.46
HDAC3-216ENST00000523088 ARL16Q0P5N6 197 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 SRSF9Q13242 221 aaKnown RBP eCLIP5.91□□□□□ -1.46
HDAC3-216ENST00000523088 LGALS9BQ3B8N2 356 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 WFDC11Q8NEX6 87 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 EEF1AKMT3Q96AZ1 226 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 GPX7Q96SL4 187 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-216ENST00000523088 MGST2Q99735 147 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 ARL2-SNX15V9GYD0 113 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 PRR14LQ5THK1 2151 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 USF3Q68DE3 2245 aa5.91□□□□□ -1.46
HDAC3-216ENST00000523088 NSD1Q96L73 2696 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-216ENST00000523088 A0A1W2PPR1 153 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 HMGN4O00479 90 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 NDUFS7O75251 213 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 MRPL33O75394 65 aaKnown RBP5.9□□□□□ -1.46
HDAC3-216ENST00000523088 GASTP01350 101 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 IGKCP01834 107 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 HLA-DRB4P13762 266 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 CSN1S1P47710 185 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 CCL20P78556 96 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 ZNF493Q6ZR52 646 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 MMD2Q8IY49 270 aa5.9□□□□□ -1.46
HDAC3-216ENST00000523088 RNF182Q8N6D2 247 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms