RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 IGHV3OR16-13A0A075B7E8 117 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A1W2PRD5 423 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A1W2PRF3 423 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A1W2PRM7 423 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 hADV38S2A0JD32 116 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 IZUMO1RA6ND01 250 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 F8W1H4 67 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 C15orf65H3BRN8 121 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 H3BUT2 72 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 J3QT63 122 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 K7EQM0 130 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 IGHV3-7P01780 117 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 SCTP09683 121 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR5AL1P0C617 328 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 DEFA4P12838 97 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 PMCHP20382 165 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 COX5AP20674 150 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 CFHR2P36980 270 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 GNG4P50150 75 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 UCNP55089 124 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 PLP1P60201 277 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 HBG1P69891 147 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 HBG2P69892 147 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF90Q03938 601 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC38A11Q08AI6 406 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 KLRD1Q13241 179 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 WFDC2Q14508 124 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 LTC4SQ16873 150 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 RPEL1Q2QD12 228 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q56UQ5 140 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 ACP7Q6ZNF0 438 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 FAM231DQ6ZW35 169 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 DOLPP1Q86YN1 238 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 FAM58AQ8N1B3 248 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 TPRX1Q8N7U7 411 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 WDR31Q8NA23 367 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 GATD1Q8NB37 220 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 ATP6V0E2Q8NHE4 81 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 CHCHD10Q8WYQ3 142 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 CHCHD1Q96BP2 118 aaKnown RBP2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 LINC01600Q96MT4 127 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 NDFIP1Q9BT67 221 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 FAM103A1Q9BTL3 118 aaKnown RBP2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM147Q9BVK8 224 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF442Q9H7R0 627 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 CCL28Q9NRJ3 127 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 HIGD1BQ9P298 99 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 NAT8BQ9UHF3 227 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF257Q9Y2Q1 563 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 INSIG2Q9Y5U4 225 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 FREM1Q5H8C1 2179 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 SVILO95425 2214 aa2.14□□□□□ -2.07
HMGB1P41-201ENST00000520234 ASCC3Q8N3C0 2202 aaKnown RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A096LNJ9 63 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 IGHV1-24A0A0C4DH33 117 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 MDFIC2A0A1B0GVS7 189 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 C5orf49A4QMS7 147 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 A6NDN8 102 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 FNDC10F2Z333 226 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 H3BP45 60 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 RAB29O14966 203 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 HMGB3O15347 200 aaKnown RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 SYNGR1O43759 233 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 INSP01308 110 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 MT-ATP8P03928 68 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 SERPINE2P07093 398 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 COL8A2P25067 703 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 OPRK1P41145 380 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 INSL3P51460 131 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 ATP5IP56385 69 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 FXYD4P59646 89 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 RPL31P62899 125 aaKnown RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 TGFBR3Q03167 851 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 ATP5G2Q06055 141 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 TFF3Q07654 80 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 GUSBP1Q15486 140 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 NSUN5P1Q3KNT7 163 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 DMRTC1Q5HYR2 192 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 GCSAMLQ5JQS6 135 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q6ZR03 302 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q6ZUT4 128 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 FA2HQ7L5A8 372 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 SBSPONQ8IVN8 264 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q8N9L7 120 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 MDS2Q8NDY4 140 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR9G4Q8NGQ1 327 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR10X1Q8NGY0 326 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR52E5Q8NH55 327 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF502Q8TBZ5 544 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 GGTLC1Q9BX51 225 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC25A39Q9BZJ4 359 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 IDI2-AS1Q9NZ38 188 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 PSENENQ9NZ42 101 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 KCNIP1Q9NZI2 227 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 RABAC1Q9UI14 185 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 VPREB3Q9UKI3 123 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 TRAPPC2LQ9UL33 140 aa2.13□□□□□ -2.07
HMGB1P41-201ENST00000520234 POLDIP2Q9Y2S7 368 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms