RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
SDHA-216ENST00000514027 VMO1Q7Z5L0 202 aa9.87□□□□□ -0.83
SDHA-216ENST00000514027 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
SDHA-216ENST00000514027 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
SDHA-216ENST00000514027 COL6A6A6NMZ7 2263 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 TRBV19A0A075B6N1 114 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 ODF3BA8MYP8 253 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 NDUFA3O95167 84 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 PRTN3P24158 256 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 HERV-K104P63124 156 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 C11orf71Q6IPW1 123 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 ZNF491Q8N8L2 437 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 ASH1LQ9NR48 2969 aaKnown RBP9.86□□□□□ -0.83
SDHA-216ENST00000514027 SPTBN4Q9H254 2564 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 TRBV7-9A0A0J9YWB2 115 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 H0Y8G0 127 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 RBPMS2Q6ZRY4 209 aaKnown RBP9.86□□□□□ -0.83
SDHA-216ENST00000514027 BCL6BQ8N143 479 aaPredicted RBP9.86□□□□□ -0.83
SDHA-216ENST00000514027 DYNAPQ8N1N2 210 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 NPBQ8NG41 125 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 ARPC1AQ92747 370 aa9.86□□□□□ -0.83
SDHA-216ENST00000514027 SPAG8Q99932 426 aaPredicted RBP9.86□□□□□ -0.83
SDHA-216ENST00000514027 IGLV2-11P01706 119 aa9.85□□□□□ -0.83
SDHA-216ENST00000514027 ARL3P36405 182 aa9.85□□□□□ -0.83
SDHA-216ENST00000514027 NDPQ00604 133 aa9.85□□□□□ -0.83
SDHA-216ENST00000514027 CT83Q5H943 113 aa9.85□□□□□ -0.83
SDHA-216ENST00000514027 ERG28Q9UKR5 140 aa9.85□□□□□ -0.83
SDHA-216ENST00000514027 CHEK1O14757 476 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 NDUFS7O75251 213 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 ATP5G2Q06055 141 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 RNF183Q96D59 192 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 VGLL1Q99990 258 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 M0R3E3 92 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 SIGLEC15Q6ZMC9 328 aa9.84□□□□□ -0.83
SDHA-216ENST00000514027 F8W1H4 67 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 BRI3O95415 125 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 ZFP36P26651 326 aaKnown RBP9.83□□□□□ -0.84
SDHA-216ENST00000514027 MFAP4P55083 255 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 RNF152Q8N8N0 203 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 DPF1Q92782 380 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 FANCD2OSQ96PS1 177 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 HSPB8Q9UJY1 196 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 IGLV11-55A0A075B6I3 123 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 TNFRSF6BO95407 300 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 HOXB4P17483 251 aaPredicted RBP9.83□□□□□ -0.84
SDHA-216ENST00000514027 WFDC2Q14508 124 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 ZNF562Q6V9R5 426 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 BOD1L2Q8IYS8 172 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 OR9G4Q8NGQ1 327 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 TPPP3Q9BW30 176 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 GFRA4Q9GZZ7 299 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 UBTD1Q9HAC8 227 aa9.83□□□□□ -0.84
SDHA-216ENST00000514027 SOX21Q9Y651 276 aaPredicted RBP9.83□□□□□ -0.84
SDHA-216ENST00000514027 WNK2Q9Y3S1 2297 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 A0A1W2PPR1 153 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 WI2-2373I1.2A0A1W2PRP0 233 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 A1L4Q6 167 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 NPIPB5A8MRT5 1133 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 NPIPB6E9PJ23 425 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 C8orf86Q6ZUL3 223 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 ZNF414Q96IQ9 312 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 C21orf62Q9NYP8 219 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 SIGLEC8Q9NYZ4 499 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 IGHV3OR16-8A0A075B7F1 116 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 AAMDCQ9H7C9 122 aa9.82□□□□□ -0.84
SDHA-216ENST00000514027 SVEP1Q4LDE5 3571 aa9.81□□□□□ -0.84
SDHA-216ENST00000514027 IGHV3-35A0A0C4DH35 117 aa9.81□□□□□ -0.84
SDHA-216ENST00000514027 LY6DQ14210 128 aa9.81□□□□□ -0.84
SDHA-216ENST00000514027 C18orf15Q96N68 181 aa9.81□□□□□ -0.84
SDHA-216ENST00000514027 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
SDHA-216ENST00000514027 SIVA1O15304 175 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 SH2D6Q7Z4S9 175 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 C8orf49Q96NF6 230 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 SPTBN1Q01082 2364 aaKnown RBP9.8□□□□□ -0.84
SDHA-216ENST00000514027 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
SDHA-216ENST00000514027 SPINK8P0C7L1 97 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 GAGE5Q13069 117 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 GAGE6Q13070 117 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 ETDBQ3ZM63 59 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 DTX2Q86UW9 622 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 LYPD1Q8N2G4 141 aa9.8□□□□□ -0.84
SDHA-216ENST00000514027 ZNF785A8K8V0 405 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 CLEC3BP05452 202 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 CT45A10P0DMU9 189 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 CYSLTR1Q9Y271 337 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 TIMM8BQ9Y5J9 83 aaPredicted RBP9.79□□□□□ -0.84
SDHA-216ENST00000514027 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 CSN3P07498 182 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 CSN1S1P47710 185 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 ZNF138P52744 262 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 ECSCRQ19T08 205 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
SDHA-216ENST00000514027 MED13LQ71F56 2210 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms