RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MARVELD1Q9BSK0 173 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 NPCDR1Q9BY65 106 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 NMES1Q9C002 83 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 TMEM14CQ9P0S9 112 aa8.72□□□□□ -1.01
VEGFA-216ENST00000512683 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
VEGFA-216ENST00000512683 TRBV19A0A075B6N1 114 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 INMT-MINDY4F8WBC2 141 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 PRAF2O60831 178 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 ZNF253O75346 499 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 NDUFB4O95168 129 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 LEPP41159 167 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 H2BFSP57053 126 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 ESRGQ1W209 222 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 GFI1BQ5VTD9 330 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 OR5C1Q8NGR4 320 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.02
VEGFA-216ENST00000512683 E5RGE8 158 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 M0R3E3 92 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 PYYP10082 97 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 HIST1H1EP10412 219 aaKnown RBP8.7□□□□□ -1.02
VEGFA-216ENST00000512683 LRRC37A5PQ49AS3 106 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 ZNF680Q8NEM1 530 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 THAP6Q8TBB0 222 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 MRPL53Q96EL3 112 aaKnown RBP8.7□□□□□ -1.02
VEGFA-216ENST00000512683 FAM167A-AS1Q96KT0 104 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 SLC25A31Q9H0C2 315 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
VEGFA-216ENST00000512683 GAGE12BA1L429 117 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 GAGE7O76087 117 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
VEGFA-216ENST00000512683 GAGE12FP0CL80 117 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 GAGE12GP0CL81 117 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 GAGE12IP0CL82 117 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 CYCSP99999 105 aaKnown RBP8.69□□□□□ -1.02
VEGFA-216ENST00000512683 SLAQ13239 276 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 SLC25A2Q9BXI2 301 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 PRELID1Q9Y255 219 aa8.69□□□□□ -1.02
VEGFA-216ENST00000512683 TRAV12-3A0A0B4J271 114 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 NMBP08949 121 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 HOXA5P20719 270 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 ERCC8Q13216 396 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 PDE6HQ13956 83 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 ANXA2RQ3ZCQ2 193 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 EXOC3-AS1Q8N2X6 119 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 PPP1R1CQ8WVI7 109 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 FAM19A4Q96LR4 140 aa8.68□□□□□ -1.02
VEGFA-216ENST00000512683 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
VEGFA-216ENST00000512683 A0A0J9YY99 117 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 J3KRW8 73 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 K7EP13 123 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 EREGO14944 169 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 BLNKQ8WV28 456 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 AGPAT4-IT1Q9H0P7 198 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 TIMM9Q9Y5J7 89 aa8.67□□□□□ -1.02
VEGFA-216ENST00000512683 TRGV2A0A075B6R0 118 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 KLLNB2CW77 178 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 MPC2O95563 127 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 C9orf47Q6ZRZ4 202 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 NFE4Q86UQ8 179 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 FXYD5Q96DB9 178 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
VEGFA-216ENST00000512683 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
VEGFA-216ENST00000512683 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 C7orf71A4D174 169 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 SIVA1O15304 175 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
VEGFA-216ENST00000512683 NBEAP1P0C6P0 100 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 CD300CQ08708 224 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 ICAM4Q14773 271 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 IBA57Q5T440 356 aaKnown RBP8.65□□□□□ -1.02
VEGFA-216ENST00000512683 EIF4E3Q8N5X7 224 aaKnown RBP8.65□□□□□ -1.02
VEGFA-216ENST00000512683 VSIG2Q96IQ7 327 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 OR51M1Q9H341 326 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 HSPB11Q9Y547 144 aa8.65□□□□□ -1.02
VEGFA-216ENST00000512683 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-216ENST00000512683 A0A096LPF7 62 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 SSNA1O43805 119 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 SPINK4O60575 86 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
VEGFA-216ENST00000512683 OR10J4P0C629 311 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 CRISP2P16562 243 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 DEFA1P59665 94 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 DEFA3P59666 94 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 KRTAP10-2P60368 255 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 Q6ZTI0 123 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 C11orf72Q8NBR9 251 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 ATP5SQ99766 215 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 VGLL1Q99990 258 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 MRPL32Q9BYC8 188 aaKnown RBP8.64□□□□□ -1.03
VEGFA-216ENST00000512683 TMPRSS5Q9H3S3 457 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 GSN-AS1Q9NRJ2 163 aa8.64□□□□□ -1.03
VEGFA-216ENST00000512683 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms