RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 GAGE12GP0CL81 117 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 GAGE12IP0CL82 117 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 C9orf47Q6ZRZ4 202 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 EIF4E3Q8N5X7 224 aaKnown RBP9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 UPK3BQ9BT76 320 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 Q9H8V8 135 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 DNAH11Q96DT5 4516 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 KIAA1109Q2LD37 5005 aa9.49□□□□□ -0.89
CCHCR1-227ENST00000508852 TRGV2A0A075B6R0 118 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 GPX1P07203 203 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 PET100P0DJ07 73 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 CRISP2P16562 243 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 CSN1S1P47710 185 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 SLAQ13239 276 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 IBA57Q5T440 356 aaKnown RBP9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 OR5C1Q8NGR4 320 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 PARD6GQ9BYG4 376 aaPredicted RBP9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
CCHCR1-227ENST00000508852 J3KRW8 73 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 ZNF324O75467 553 aaPredicted RBP9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 NDUFB4O95168 129 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 NBEAP1P0C6P0 100 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 MUC4Q99102 2169 aa9.47□□□□□ -0.89
CCHCR1-227ENST00000508852 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 M0R3E3 92 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 RGS13O14921 159 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 UPK1BO75841 260 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 PYYP10082 97 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 NHLH2Q02577 135 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 ICAM4Q14773 271 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 PAXXQ9BUH6 204 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 SLC25A2Q9BXI2 301 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 Q9H3A6 140 aa9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 DYNC1H1Q14204 4646 aaKnown RBP9.46□□□□□ -0.9
CCHCR1-227ENST00000508852 A0A0J9YY99 117 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 HOXA5P20719 270 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 RNASE4P34096 147 aaKnown RBP9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 TCL1AP56279 114 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 TAS2R45P59539 299 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 ERCC8Q13216 396 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 Q6ZTI0 123 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 WDR61Q9GZS3 305 aaKnown RBP9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 ZNF492Q9P255 531 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 FUT9Q9Y231 359 aa9.45□□□□□ -0.9
CCHCR1-227ENST00000508852 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 C16orf90A8MZG2 172 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 INMT-MINDY4F8WBC2 141 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 SPINK4O60575 86 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 ZNF138P52744 262 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 DEFA1P59665 94 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 DEFA3P59666 94 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 THAP6Q8TBB0 222 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 FAM167A-AS1Q96KT0 104 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 TMPRSS5Q9H3S3 457 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
CCHCR1-227ENST00000508852 IGHV1OR15-1A0A075B7D0 117 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 OR7C2O60412 319 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 CDK2AP2O75956 126 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 IFNA5P01569 189 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 TNP2Q05952 138 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 CD300CQ08708 224 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 ESRGQ1W209 222 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 LRRC37A5PQ49AS3 106 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 KHDC3LQ587J8 217 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 FAM74A1Q5RGS3 127 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 FAM122CQ6P4D5 195 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 MIR17HGQ75NE6 70 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 SCGB1C1Q8TD33 95 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 ST6GAL2Q96JF0 529 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 ATP5SQ99766 215 aa9.43□□□□□ -0.9
CCHCR1-227ENST00000508852 ZNF415Q09FC8 603 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 ZNF575Q86XF7 245 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 ARL6IP6Q8N6S5 226 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 MARVELD1Q9BSK0 173 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 OR5AC2Q9NZP5 309 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 PRO0255Q9UI72 69 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
CCHCR1-227ENST00000508852 IGKV2-40A0A087WW87 121 aaPredicted RBP9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 PAX4O43316 350 aa9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 SSNA1O43805 119 aa9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 SIX6O95475 246 aa9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 IGKV2D-40P01614 121 aaPredicted RBP9.41□□□□□ -0.9
CCHCR1-227ENST00000508852 ZNF266Q14584 549 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1241 ms