RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 RPS20P60866 119 aaKnown RBP8.6□□□□□ -1.03
SH3RF1-203ENST00000508685 Q8N9W7 124 aa8.6□□□□□ -1.03
SH3RF1-203ENST00000508685 DPF1Q92782 380 aa8.6□□□□□ -1.03
SH3RF1-203ENST00000508685 THYN1Q9P016 225 aa8.6□□□□□ -1.03
SH3RF1-203ENST00000508685 TCF21O43680 179 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 GNG7O60262 68 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 IL4P05112 153 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 TEX15Q9BXT5 2789 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 IGHV7-81A0A0B4J1V7 117 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 FCGR2BP31994 310 aaPredicted RBP8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 PRSS3P2Q8NHM4 247 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
SH3RF1-203ENST00000508685 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 IGHV4-38-2P0DP08 117 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 EGR2P11161 476 aaPredicted RBP8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 RPL7P18124 248 aaKnown RBP8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 TTC9CQ8N5M4 171 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 TMEM189A5PLL7 270 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 ZNF785A8K8V0 405 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 MSMBP08118 114 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 SRSF2Q01130 221 aaKnown RBP8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 TMEM219Q86XT9 240 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 ZNF747Q9BV97 191 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 SCRT2Q9NQ03 307 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 U3KQK5 164 aa8.58□□□□□ -1.04
SH3RF1-203ENST00000508685 MXRA5Q9NR99 2828 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 IGLV11-55A0A075B6I3 123 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 IGHV1-69DA0A0B4J2H0 117 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 M0QZ24 198 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 IGHV1-69P01742 117 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 BMI1P35226 326 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 KRTAP10-9P60411 292 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 HIST1H1AQ02539 215 aaPredicted RBP8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 PSMG4Q5JS54 123 aa8.57□□□□□ -1.04
SH3RF1-203ENST00000508685 CRIP1P50238 77 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 UNQ5815/PRO19632Q6UWF5 114 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 OR1N2Q8NGR9 330 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 C17orf77Q96MU5 243 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 hDV102S1A0JD36 115 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 K7EP13 123 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 ATP6V0E1O15342 81 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 CCL25O15444 150 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 IGHV3-23P01764 117 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 RAB9AP51151 201 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 ECSCRQ19T08 205 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 ORMDL3Q8N138 153 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 NPFFR1Q9GZQ6 430 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 HIF1ANQ9NWT6 349 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 C21orf62Q9NYP8 219 aa8.56□□□□□ -1.04
SH3RF1-203ENST00000508685 CSPG4Q6UVK1 2322 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 F8W735 103 aaPredicted RBP8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 NUDT3O95989 172 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 CSN3P07498 182 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 COX8AP10176 69 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 BVES-AS1Q5T3Y7 98 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 DEFB125Q8N687 156 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 MAPK1IP1LQ8NDC0 245 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 PIFOQ8TCI5 191 aa8.55□□□□□ -1.04
SH3RF1-203ENST00000508685 CD5LO43866 347 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 AVPP01185 164 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 ZNF138P52744 262 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 MPV17L2Q567V2 206 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 B4DSR2 109 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 G3V318 75 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 RHOGP84095 191 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 LGALS9CQ6DKI2 356 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 C5orf56Q8N8D9 126 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 PRELID3AQ96N28 172 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 RABAC1Q9UI14 185 aa8.54□□□□□ -1.04
SH3RF1-203ENST00000508685 SH2D1AO60880 128 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 PPBPP02775 128 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 GPR183P32249 361 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 DSCR9P59020 149 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 VAMP3Q15836 100 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 BCL6BQ8N143 479 aaPredicted RBP8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 OR4C5Q8NGB2 326 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 PRR25Q96S07 402 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 A0A096LNT2 108 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 OR2T8A6NH00 312 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 M0R3E3 92 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 SEC11AP67812 179 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 C8orf49Q96NF6 230 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
SH3RF1-203ENST00000508685 PDZD2O15018 2839 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 CCDC168Q8NDH2 2452 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 D6R8Y8 96 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 TAX1BP3O14907 124 aa8.52□□□□□ -1.05
SH3RF1-203ENST00000508685 SIVA1O15304 175 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms