RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 IGKV2D-40P01614 121 aaPredicted RBP11.04□□□□□ -0.64
CLDND1-211ENST00000506575 M6PRP20645 277 aa11.04□□□□□ -0.64
CLDND1-211ENST00000506575 CSN1S1P47710 185 aa11.04□□□□□ -0.64
CLDND1-211ENST00000506575 RANP62826 216 aaKnown RBP11.04□□□□□ -0.64
CLDND1-211ENST00000506575 ZNF266Q14584 549 aa11.04□□□□□ -0.64
CLDND1-211ENST00000506575 LYPD1Q8N2G4 141 aa11.04□□□□□ -0.64
CLDND1-211ENST00000506575 RNASE8Q8TDE3 154 aaKnown RBP11.04□□□□□ -0.64
CLDND1-211ENST00000506575 NOP10Q9NPE3 64 aaKnown RBP11.04□□□□□ -0.64
CLDND1-211ENST00000506575 C7orf71A4D174 169 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 SNURFLB1AK76 121 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 GPX1P07203 203 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 TMEM88Q6PEY1 159 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 INO80EQ8NBZ0 244 aaPredicted RBP11.03□□□□□ -0.64
CLDND1-211ENST00000506575 ZNF503Q96F45 646 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 AQP10Q96PS8 301 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 PYGO2Q9BRQ0 406 aa11.03□□□□□ -0.64
CLDND1-211ENST00000506575 CBY3A6NI87 242 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 ATP5G1P05496 136 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
CLDND1-211ENST00000506575 ATP5G3P48201 142 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 RAB2AP61019 212 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 UBE2DNLQ8IWF7 75 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 HSD17B11Q8NBQ5 300 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 OR10G4Q8NGN3 311 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 OR10G9Q8NGN4 311 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 OR10G7Q8NGN6 311 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 VGLL1Q99990 258 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 Q9H3A6 140 aa11.02□□□□□ -0.65
CLDND1-211ENST00000506575 KLLNB2CW77 178 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 F5H768 121 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 NMBP08949 121 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 CRISP2P16562 243 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 ZNF138P52744 262 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 BTN1A1Q13410 526 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 PQLC2Q6ZP29 291 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 POM121L12Q8N7R1 296 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 ZNF492Q9P255 531 aa11.01□□□□□ -0.65
CLDND1-211ENST00000506575 FXYD6-FXYD2A0A087WZ82 144 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 RBAKDNA6NC62 111 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 EIF3GO75821 320 aaKnown RBP eCLIP11□□□□□ -0.65
CLDND1-211ENST00000506575 CD300CQ08708 224 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 Q5BKY6 102 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 FAM74A1Q5RGS3 127 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 HYLS1Q96M11 299 aa11□□□□□ -0.65
CLDND1-211ENST00000506575 BIRC6Q9NR09 4857 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 DNAH6Q9C0G6 4158 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 CDC34P49427 236 aaPredicted RBP10.99□□□□□ -0.65
CLDND1-211ENST00000506575 EIF4E3Q8N5X7 224 aaKnown RBP10.99□□□□□ -0.65
CLDND1-211ENST00000506575 ZNF680Q8NEM1 530 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 OR2T35Q8NGX2 323 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 OR2G3Q8NGZ4 309 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 CMTM2Q8TAZ6 248 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 PSMG3Q9BT73 122 aaPredicted RBP10.99□□□□□ -0.65
CLDND1-211ENST00000506575 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
CLDND1-211ENST00000506575 TRBV7-9A0A0J9YWB2 115 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 RGS13O14921 159 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
CLDND1-211ENST00000506575 ZNF324O75467 553 aaPredicted RBP10.98□□□□□ -0.65
CLDND1-211ENST00000506575 MBP02144 154 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 ATP6V0CP27449 155 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 ZFAND2AQ8N6M9 145 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 Q8TAT8 98 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 LINC00467Q9BRT7 94 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 RPH3ALQ9UNE2 315 aa10.98□□□□□ -0.65
CLDND1-211ENST00000506575 BORCS7-ASMTA0A0B4J1R7 106 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 GAGE12BA1L429 117 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 PGPA6NDG6 321 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 DIRC3C9JPN6 131 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 GAGE7O76087 117 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 GAGE12FP0CL80 117 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 GAGE12GP0CL81 117 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 GAGE12IP0CL82 117 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 SERF2P84101 59 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 TNFSF18Q9UNG2 199 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
CLDND1-211ENST00000506575 ARL14EPLP0DKL9 152 aa10.96□□□□□ -0.65
CLDND1-211ENST00000506575 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.65
CLDND1-211ENST00000506575 ANXA2RQ3ZCQ2 193 aa10.96□□□□□ -0.65
CLDND1-211ENST00000506575 RNF212Q495C1 297 aa10.96□□□□□ -0.65
CLDND1-211ENST00000506575 PRR9Q5T870 116 aa10.96□□□□□ -0.65
CLDND1-211ENST00000506575 GNPNAT1Q96EK6 184 aaPredicted RBP10.96□□□□□ -0.65
CLDND1-211ENST00000506575 ATG101Q9BSB4 218 aa10.96□□□□□ -0.65
CLDND1-211ENST00000506575 GSN-AS1Q9NRJ2 163 aa10.96□□□□□ -0.65
CLDND1-211ENST00000506575 DNAH10Q8IVF4 4471 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 IGHV1OR15-1A0A075B7D0 117 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 RNF222A6NCQ9 220 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 NUDT3O95989 172 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 OR5I1Q13606 314 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 RPL7L1Q6DKI1 246 aaKnown RBP10.95□□□□□ -0.66
CLDND1-211ENST00000506575 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 RAB24Q969Q5 203 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 ARPC5LQ9BPX5 153 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 SH3BGRL3Q9H299 93 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 LENEPQ9Y5L5 61 aa10.95□□□□□ -0.66
CLDND1-211ENST00000506575 STAG3L2P0CL84 134 aa10.94□□□□□ -0.66
CLDND1-211ENST00000506575 STAG3L3P0CL85 134 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms