RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 Q6ZTI0 123 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 S100A7AQ86SG5 101 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 C11orf72Q8NBR9 251 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 OR5C1Q8NGR4 320 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 BLNKQ8WV28 456 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 PFDN5Q99471 154 aa9.12□□□□□ -0.95
DDX41-204ENST00000504807 A0A0J9YY99 117 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 KLLNB2CW77 178 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 RAB31Q13636 194 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 CLINT1Q14677 625 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 GUK1Q16774 197 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 C1orf134Q5TEV5 83 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 MZT2BQ6NZ67 158 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 LINC00299Q6ZSB3 139 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 STX12Q86Y82 276 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 ODF3Q96PU9 254 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 VGLL1Q99990 258 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 TP53TG3Q9ULZ0 132 aa9.11□□□□□ -0.95
DDX41-204ENST00000504807 FLG2Q5D862 2391 aaPredicted RBP9.1□□□□□ -0.95
DDX41-204ENST00000504807 HMCN2Q8NDA2 5059 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 TRAV26-1A0A087WT03 109 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
DDX41-204ENST00000504807 HBG1P69891 147 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 HBG2P69892 147 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 ICAM4Q14773 271 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 ZFAND2AQ8N6M9 145 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 S100ZQ8WXG8 99 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 FXYD5Q96DB9 178 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 PHYHIPLQ96FC7 376 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 C18orf15Q96N68 181 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 RNF24Q9Y225 148 aa9.1□□□□□ -0.95
DDX41-204ENST00000504807 C7orf71A4D174 169 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 OR10J4P0C629 311 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 LEPP41159 167 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 ATP6V1FQ16864 119 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 Q8TAT8 98 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 ENKURQ8TC29 256 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 MRPL53Q96EL3 112 aaKnown RBP9.09□□□□□ -0.95
DDX41-204ENST00000504807 VSIG2Q96IQ7 327 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 NMES1Q9C002 83 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 WDR61Q9GZS3 305 aaKnown RBP9.09□□□□□ -0.95
DDX41-204ENST00000504807 KLF12Q9Y4X4 402 aa9.09□□□□□ -0.95
DDX41-204ENST00000504807 E5RGE8 158 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 INMT-MINDY4F8WBC2 141 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 RNASE4P34096 147 aaKnown RBP9.08□□□□□ -0.96
DDX41-204ENST00000504807 OR5I1Q13606 314 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 ESRGQ1W209 222 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 C9orf47Q6ZRZ4 202 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 MARVELD1Q9BSK0 173 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 WFDC1Q9HC57 220 aa9.08□□□□□ -0.96
DDX41-204ENST00000504807 MPDU1O75352 247 aa9.07□□□□□ -0.96
DDX41-204ENST00000504807 CRISP2P16562 243 aa9.07□□□□□ -0.96
DDX41-204ENST00000504807 FAM3BP58499 235 aaPredicted RBP9.07□□□□□ -0.96
DDX41-204ENST00000504807 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
DDX41-204ENST00000504807 RXFP4Q8TDU9 374 aa9.07□□□□□ -0.96
DDX41-204ENST00000504807 PPP1R1CQ8WVI7 109 aa9.07□□□□□ -0.96
DDX41-204ENST00000504807 PYGO2Q9BRQ0 406 aa9.07□□□□□ -0.96
DDX41-204ENST00000504807 TIMM9Q9Y5J7 89 aa9.07□□□□□ -0.96
DDX41-204ENST00000504807 RLN2P04090 185 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
DDX41-204ENST00000504807 NBEAP1P0C6P0 100 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 M6PRP20645 277 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 PDE6HQ13956 83 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 CCDC28AQ8IWP9 274 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 GNPNAT1Q96EK6 184 aaPredicted RBP9.06□□□□□ -0.96
DDX41-204ENST00000504807 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 SMIM3Q9BZL3 60 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 OR51M1Q9H341 326 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 PTTG2Q9NZH5 202 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 FUT9Q9Y231 359 aa9.06□□□□□ -0.96
DDX41-204ENST00000504807 A0A096LPF7 62 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 SNURFLB1AK76 121 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 C6orf223Q8N319 242 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 LINC00477Q96M19 166 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 PAXXQ9BUH6 204 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 ZNF492Q9P255 531 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
DDX41-204ENST00000504807 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 SPINK4O60575 86 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 PRAF2O60831 178 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 MPC2O95563 127 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 CCL18P55774 89 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 TCL1AP56279 114 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 ANXA2RQ3ZCQ2 193 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
DDX41-204ENST00000504807 ATP5SQ99766 215 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 Q9H8V8 135 aa9.04□□□□□ -0.96
DDX41-204ENST00000504807 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
DDX41-204ENST00000504807 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
DDX41-204ENST00000504807 J3QL48 77 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms