RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 PSG3Q16557 428 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 SHANK2-AS3Q9BTD1 123 aa10.57□□□□□ -0.72
GPC1-209ENST00000495100 GNLYP22749 145 aa10.56□□□□□ -0.72
GPC1-209ENST00000495100 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
GPC1-209ENST00000495100 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
GPC1-209ENST00000495100 CHODLQ9H9P2 273 aa10.56□□□□□ -0.72
GPC1-209ENST00000495100 H3BVH4 76 aa10.56□□□□□ -0.72
GPC1-209ENST00000495100 TMEM78Q5T7P6 136 aa10.56□□□□□ -0.72
GPC1-209ENST00000495100 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 CSMD2Q7Z408 3487 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 EGR2P11161 476 aaPredicted RBP10.55□□□□□ -0.72
GPC1-209ENST00000495100 DLX6P56179 175 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 LEPP41159 167 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 RPL24P83731 157 aaKnown RBP10.55□□□□□ -0.72
GPC1-209ENST00000495100 C11orf44Q8N8P7 122 aa10.55□□□□□ -0.72
GPC1-209ENST00000495100 KLRB1Q12918 225 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 TMEM95Q3KNT9 176 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 CCDC144NLQ6NUI1 221 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 ZNF414Q96IQ9 312 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 FOXC2Q99958 501 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 NDUFA3O95167 84 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 LTAP01374 205 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 GTSCR1Q86UQ5 136 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 ORMDL3Q8N138 153 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 H3BUT2 72 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 NPYP01303 97 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 ZNF80P51504 273 aaPredicted RBP10.54□□□□□ -0.72
GPC1-209ENST00000495100 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.54□□□□□ -0.72
GPC1-209ENST00000495100 CRIP1P50238 77 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 ADORA2A-AS1P86434 159 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 SIGLEC15Q6ZMC9 328 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 S100A7AQ86SG5 101 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 LINC00477Q96M19 166 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 JKAMPQ9P055 326 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 A0A1W2PPR1 153 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 ATP5J2P56134 94 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 K7EP13 123 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 CCL25O15444 150 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 TGFAP01135 160 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
GPC1-209ENST00000495100 LINC00311Q8N616 119 aa10.52□□□□□ -0.73
GPC1-209ENST00000495100 RNASE4P34096 147 aaKnown RBP10.52□□□□□ -0.73
GPC1-209ENST00000495100 METTL26Q96S19 204 aa10.52□□□□□ -0.73
GPC1-209ENST00000495100 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.73
GPC1-209ENST00000495100 C2orf70A6NJV1 201 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 IGF1P05019 195 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 PRTN3P24158 256 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 FOXE3Q13461 319 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 FANCD2OSQ96PS1 177 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 KAAG1Q9UBP8 84 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 ZFP30Q9Y2G7 519 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 CELSR2Q9HCU4 2923 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 PCP2Q8IVA1 136 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 ZNF502Q8TBZ5 544 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 MRPL51Q4U2R6 128 aaKnown RBP10.51□□□□□ -0.73
GPC1-209ENST00000495100 ZNF562Q6V9R5 426 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 Q8N976 141 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 URB1-AS1Q96HZ7 61 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 C7orf69Q9H7B7 122 aa10.51□□□□□ -0.73
GPC1-209ENST00000495100 PVRIGQ6DKI7 326 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 MRGPRG-AS1Q2M3A8 158 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 ANKRD39Q53RE8 183 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 FAM231DQ6ZW35 169 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 PRR25Q96S07 402 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
GPC1-209ENST00000495100 NF1P21359 2839 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 H3BRN7 92 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 TRBV12-3P01733 135 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 CTSGP08311 255 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 EFNA4P52798 201 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 NCOR1P1Q9H4R4 102 aa10.5□□□□□ -0.73
GPC1-209ENST00000495100 H3BUX3 64 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 ATP5G2Q06055 141 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
GPC1-209ENST00000495100 IFI27L1Q96BM0 104 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 IGHV7-81A0A0B4J1V7 117 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 KIR3DS1Q14943 382 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
GPC1-209ENST00000495100 COL25A1Q9BXS0 654 aaPredicted RBP10.49□□□□□ -0.73
GPC1-209ENST00000495100 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 FABP5P3A8MUU1 101 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 BMI1P35226 326 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 ATP5L2Q7Z4Y8 100 aa10.49□□□□□ -0.73
GPC1-209ENST00000495100 RIPPLY3P57055 190 aa10.48□□□□□ -0.73
GPC1-209ENST00000495100 BLCAPP62952 87 aa10.48□□□□□ -0.73
GPC1-209ENST00000495100 MLST8Q9BVC4 326 aa10.48□□□□□ -0.73
GPC1-209ENST00000495100 PHLDA3Q9Y5J5 127 aa10.48□□□□□ -0.73
GPC1-209ENST00000495100 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
GPC1-209ENST00000495100 CRYGCP07315 174 aa10.48□□□□□ -0.73
GPC1-209ENST00000495100 NEU4Q8WWR8 484 aaPredicted RBP10.48□□□□□ -0.73
GPC1-209ENST00000495100 TNFRSF14Q92956 283 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms