RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 CD300CQ08708 224 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 OR5I1Q13606 314 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 RAB31Q13636 194 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 GUK1Q16774 197 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 C11orf72Q8NBR9 251 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 OR5C1Q8NGR4 320 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 CHAC2Q8WUX2 184 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 TMEM14CQ9P0S9 112 aa8.08□□□□□ -1.12
VTI1A-208ENST00000494728 C7orf71A4D174 169 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 KLLNB2CW77 178 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 HIST1H1EP10412 219 aaKnown RBP8.07□□□□□ -1.12
VTI1A-208ENST00000494728 LEPP41159 167 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 HBG1P69891 147 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 HBG2P69892 147 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 CLINT1Q14677 625 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 LRRC37A5PQ49AS3 106 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 BLNKQ8WV28 456 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 MRPL53Q96EL3 112 aaKnown RBP8.07□□□□□ -1.12
VTI1A-208ENST00000494728 AGPAT4-IT1Q9H0P7 198 aa8.07□□□□□ -1.12
VTI1A-208ENST00000494728 SNURFLB1AK76 121 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-208ENST00000494728 UPK1BO75841 260 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 RLN2P04090 185 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 M6PRP20645 277 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 H2BFSP57053 126 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 SOHLH1Q5JUK2 328 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 C6orf223Q8N319 242 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 ZFAND2AQ8N6M9 145 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 GNPNAT1Q96EK6 184 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-208ENST00000494728 PHYHIPLQ96FC7 376 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 VSIG2Q96IQ7 327 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 VGLL1Q99990 258 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 PYGO2Q9BRQ0 406 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 GSN-AS1Q9NRJ2 163 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 TP53TG3Q9ULZ0 132 aa8.06□□□□□ -1.12
VTI1A-208ENST00000494728 EIF3GO75821 320 aaKnown RBP eCLIP8.05□□□□□ -1.12
VTI1A-208ENST00000494728 SLC25A5P05141 298 aaKnown RBP8.05□□□□□ -1.12
VTI1A-208ENST00000494728 OR10J4P0C629 311 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 CCL18P55774 89 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 DAZ2Q13117 558 aaKnown RBP8.05□□□□□ -1.12
VTI1A-208ENST00000494728 PDE6HQ13956 83 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 ICAM4Q14773 271 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 ATP6V1FQ16864 119 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 ESRGQ1W209 222 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 MZT2BQ6NZ67 158 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 FAM122CQ6P4D5 195 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 CCDC28AQ8IWP9 274 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 Q8TAT8 98 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 ENKURQ8TC29 256 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 FXYD5Q96DB9 178 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 ZNF503Q96F45 646 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 KLF12Q9Y4X4 402 aa8.05□□□□□ -1.12
VTI1A-208ENST00000494728 MPDU1O75352 247 aa8.04□□□□□ -1.12
VTI1A-208ENST00000494728 CRISP2P16562 243 aa8.04□□□□□ -1.12
VTI1A-208ENST00000494728 RNASE4P34096 147 aaKnown RBP8.04□□□□□ -1.12
VTI1A-208ENST00000494728 C9orf47Q6ZRZ4 202 aa8.04□□□□□ -1.12
VTI1A-208ENST00000494728 NMES1Q9C002 83 aa8.04□□□□□ -1.12
VTI1A-208ENST00000494728 WDR61Q9GZS3 305 aaKnown RBP8.04□□□□□ -1.12
VTI1A-208ENST00000494728 TIMM9Q9Y5J7 89 aa8.04□□□□□ -1.12
VTI1A-208ENST00000494728 A0A096LPF7 62 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 E5RGE8 158 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 TCL1AP56279 114 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 UPK3BQ9BT76 320 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 Q9H8V8 135 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 PRELID1Q9Y255 219 aa8.03□□□□□ -1.12
VTI1A-208ENST00000494728 TRGV1A0A0A0MS02 117 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 SPINK4O60575 86 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 NBEAP1P0C6P0 100 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 ANXA2RQ3ZCQ2 193 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
VTI1A-208ENST00000494728 ZNF680Q8NEM1 530 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 PPP1R1CQ8WVI7 109 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 LINC00477Q96M19 166 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 C18orf15Q96N68 181 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 OR51M1Q9H341 326 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 Q9H3A6 140 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 AAMDCQ9H7C9 122 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 MRPL16Q9NX20 251 aaKnown RBP8.02□□□□□ -1.13
VTI1A-208ENST00000494728 ZNF492Q9P255 531 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 FUT9Q9Y231 359 aa8.02□□□□□ -1.13
VTI1A-208ENST00000494728 FAT1Q14517 4588 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 C16orf90A8MZG2 172 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 INMT-MINDY4F8WBC2 141 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 H3BNG1 76 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 IGHV3-53P01767 116 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 GPX1P07203 203 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 PAXXQ9BUH6 204 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 MRPL32Q9BYC8 188 aaKnown RBP8.01□□□□□ -1.13
VTI1A-208ENST00000494728 SMIM3Q9BZL3 60 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 SLC25A31Q9H0C2 315 aa8.01□□□□□ -1.13
VTI1A-208ENST00000494728 MRPS16Q9Y3D3 137 aaKnown RBP8.01□□□□□ -1.13
VTI1A-208ENST00000494728 TRGV2A0A075B6R0 118 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 OR7C2O60412 319 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 MPC2O95563 127 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 KRTAP10-2P60368 255 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms