RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MUC4Q99102 2169 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 FRMPD1Q5SYB0 1578 aa0.7□□□□□ -2.3
CLK1-213ENST00000492793 ZNF727A8MUV8 499 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 RPL7P18124 248 aaKnown RBP0.69□□□□□ -2.3
CLK1-213ENST00000492793 KDELR1P24390 212 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 SDC2P34741 201 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 POLR2HP52434 150 aaKnown RBP0.69□□□□□ -2.3
CLK1-213ENST00000492793 MRPS36P82909 103 aaKnown RBP0.69□□□□□ -2.3
CLK1-213ENST00000492793 NEDD8Q15843 81 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 TMEM128Q5BJH2 165 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 SPINK9Q5DT21 86 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.69□□□□□ -2.3
CLK1-213ENST00000492793 OR5H6Q8NGV6 325 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 CCL4L1Q8NHW4 92 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 DIRC1Q969H9 104 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 MCEEQ96PE7 176 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 LIMD2Q9BT23 127 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 MRPL40Q9NQ50 206 aaKnown RBP0.69□□□□□ -2.3
CLK1-213ENST00000492793 NDUFAF1Q9Y375 327 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 MED31Q9Y3C7 131 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 TRAPPC8Q9Y2L5 1435 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 NISCHQ9Y2I1 1504 aa0.69□□□□□ -2.3
CLK1-213ENST00000492793 NDUFA6P56556 154 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 TOMM20LQ6UXN7 152 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 CASC2Q6XLA1 102 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 Q6ZQY7 126 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 LINC00299Q6ZSB3 139 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 LINC00305Q7Z4B0 112 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 LINC00269Q8N2A0 174 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 OR5AK2Q8NH90 309 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 CCDC115Q96NT0 180 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 TRAPPC2LQ9UL33 140 aa0.68□□□□□ -2.3
CLK1-213ENST00000492793 ZNF462Q96JM2 2506 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 BCL9O00512 1426 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 C3orf85A0A1B0GTC6 90 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 GNG14A0A1W2PPG7 69 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 PRORSD1PA6NEY8 169 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 FAM107AO95990 144 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 RPS3P23396 243 aaKnown RBP eCLIP0.67□□□□□ -2.3
CLK1-213ENST00000492793 S100GP29377 79 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 SPINT3P49223 89 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 SAMD13Q5VXD3 122 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 ZCCHC23Q6ZST2 131 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 TEX29Q8N6K0 151 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 OR9Q1Q8NGQ5 310 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 PRELID3AQ96N28 172 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 AP1S3Q96PC3 154 aa0.67□□□□□ -2.3
CLK1-213ENST00000492793 TRAV13-1A0A0B4J241 112 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 TRBV27A0A0K0K1C4 114 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 H3BMG7 143 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 IGHV3-33P01772 117 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 NBEAP1P0C6P0 100 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 DR1Q01658 176 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 TAC4Q86UU9 113 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 LXNQ9BS40 222 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 ANK1P16157 1881 aa0.66□□□□□ -2.3
CLK1-213ENST00000492793 KIAA1107Q9UPP5 1409 aa0.65□□□□□ -2.3
CLK1-213ENST00000492793 LOC107984156A0A0G2JMH3 177 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 TRBV7-6A0A0J9YX20 115 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 LOC107984640A0A0U1RRK4 108 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 TSTD3H0UI37 97 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 TRACP01848 142 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 TPT1P13693 172 aaKnown RBP0.65□□□□□ -2.31
CLK1-213ENST00000492793 FOXA3P55318 350 aaPredicted RBP0.65□□□□□ -2.31
CLK1-213ENST00000492793 MAXP61244 160 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 RPL37AP61513 92 aaKnown RBP0.65□□□□□ -2.31
CLK1-213ENST00000492793 ARL17AQ8IVW1 177 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 C5orf17Q8NAS9 161 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 TMEM35BQ8NCS4 154 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 CLEC2BQ92478 149 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 CBLN4Q9NTU7 201 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 FKBP11Q9NYL4 201 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 GINS2Q9Y248 185 aa0.65□□□□□ -2.31
CLK1-213ENST00000492793 ZCCHC11Q5TAX3 1644 aaKnown RBP0.64□□□□□ -2.31
CLK1-213ENST00000492793 BCORL1Q5H9F3 1711 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 M0QZK8 103 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 ZNF137PP52743 207 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 FXYD6P3P58550 94 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 C6orf52Q5T4I8 152 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 TMEM229BQ8NBD8 167 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 MORN4Q8NDC4 146 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 SKA2Q8WVK7 121 aaPredicted RBP0.64□□□□□ -2.31
CLK1-213ENST00000492793 NABP2Q9BQ15 211 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 TRPM7Q96QT4 1865 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 ATG2AQ2TAZ0 1938 aa0.64□□□□□ -2.31
CLK1-213ENST00000492793 KNTC1P50748 2209 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 BBIP1A8MTZ0 92 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 SULT1C4O75897 302 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 CRYGSP22914 178 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 RPS28P62857 69 aaKnown RBP0.63□□□□□ -2.31
CLK1-213ENST00000492793 Q6ZS92 163 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 CCL19Q99731 98 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 HSPB11Q9Y547 144 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 FAM135BQ49AJ0 1406 aa0.63□□□□□ -2.31
CLK1-213ENST00000492793 A2MP01023 1474 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 TCOF1Q13428 1488 aaKnown RBP0.62□□□□□ -2.31
CLK1-213ENST00000492793 A0A0J9YY99 117 aa0.62□□□□□ -2.31
CLK1-213ENST00000492793 K7EIL1 84 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms