RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CCDC179H3BU77 68 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 J3KT08 172 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 ZNF682O95780 498 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 APOA2P02652 100 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 LINC00032P0C843 101 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 SLC25A6P12236 298 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 PTHLHP12272 177 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 RPL7P18124 248 aaKnown RBP2.03□□□□□ -2.08
SSR1-209ENST00000488834 NTF3P20783 257 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 CCL1P22362 96 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 CDK2P24941 298 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 CRYBB3P26998 211 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 BLVRBP30043 206 aaPredicted RBP2.03□□□□□ -2.08
SSR1-209ENST00000488834 G6PCP35575 357 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 CCR2P41597 374 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 PSMB3P49720 205 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 HSPE1P61604 102 aaKnown RBP2.03□□□□□ -2.08
SSR1-209ENST00000488834 CATR1Q13166 79 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 RPL7L1Q6DKI1 246 aaKnown RBP2.03□□□□□ -2.08
SSR1-209ENST00000488834 UNQ9165/PRO28630Q6UXU0 137 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 OOSP2Q86WS3 158 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 LINC00471Q8N535 108 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 TEX29Q8N6K0 151 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 SIGLECL1Q8N7X8 197 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 TMEM75Q8N9X5 138 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 TMEM229BQ8NBD8 167 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 OR51A4Q8NGJ6 313 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 OR5H2Q8NGV7 314 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 OR2T10Q8NGZ9 312 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 OR8S1Q8NH09 359 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 OR1L1Q8NH94 360 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 SLC25A44Q96H78 314 aaPredicted RBP2.03□□□□□ -2.08
SSR1-209ENST00000488834 GPER1Q99527 375 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 SPANXDQ9BXN6 97 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 COMMD5Q9GZQ3 224 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 PLEKHF2Q9H8W4 249 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 CMC2Q9NRP2 79 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 ACER3Q9NUN7 267 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 C21orf62Q9NYP8 219 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 WASHC3Q9Y3C0 194 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 FIS1Q9Y3D6 152 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 THADAQ6YHU6 1953 aa2.03□□□□□ -2.08
SSR1-209ENST00000488834 PLXNA2O75051 1894 aa2.03□□□□□ -2.09
SSR1-209ENST00000488834 SNRNP200O75643 2136 aaKnown RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 PCDH15Q96QU1 1955 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 IGHV3-49A0A0A0MS15 119 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 TMED7-TICAM2A0A0A6YYA0 188 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 TRAV8-1A0A0A6YYK1 113 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 MUC21A0A0G2JKD1 596 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 MUC21A0A140T8X8 626 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 A0A1B0GV50 99 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 DUXBA0A1W2PPF3 345 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 A0A1W2PPM0 123 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 C9JAW5 83 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 FNDC10F2Z333 226 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 C17orf112F2Z3M2 114 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 J3QRE1 110 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 HCRTO43612 131 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 ZNF737O75373 536 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 TNFP01375 233 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 MT-ATP8P03928 68 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 LINC00694P0DN24 101 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 EMP1P54849 157 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 DYNLT1P63172 113 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 ELOCQ15369 112 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 RNASE13Q5GAN3 156 aaKnown RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 MEIG1Q5JSS6 88 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 Q6AWC8 147 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 GUSBP11Q6P575 273 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 ZNF322Q6U7Q0 402 aaPredicted RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 Q6ZUT4 128 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 TCF23Q7RTU1 214 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 SPATA12Q7Z6I5 190 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 MARCH3Q86UD3 253 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 PDPNQ86YL7 162 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 C10orf111Q8N326 155 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 LY6G5BQ8NDX9 201 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 OR2M3Q8NG83 312 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 OR10AG1Q8NH19 301 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 OR4K13Q8NH42 304 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 OR51H1Q8NH63 302 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 MRPL30Q8TCC3 161 aaKnown RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 MBD3L1Q8WWY6 194 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 KLK6Q92876 244 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 MAL2Q969L2 176 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 GNPNAT1Q96EK6 184 aaPredicted RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 C2orf50Q96LR7 162 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 OR2H1Q9GZK4 316 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 CST11Q9H112 138 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 OR2D2Q9H210 308 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 RERGLQ9H628 205 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 SND1-IT1Q9HBX3 110 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 RABAC1Q9UI14 185 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 HIGD1AQ9Y241 93 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 NOP16Q9Y3C1 178 aaKnown RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 TRAPPC1Q9Y5R8 145 aa2.02□□□□□ -2.09
SSR1-209ENST00000488834 SOX21Q9Y651 276 aaPredicted RBP2.02□□□□□ -2.09
SSR1-209ENST00000488834 MYO16Q9Y6X6 1858 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms