RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SRP19P09132 144 aaKnown RBP8.21□□□□□ -1.1
HDLBP-242ENST00000488013 ZNF138P52744 262 aa8.21□□□□□ -1.1
HDLBP-242ENST00000488013 FLI1Q01543 452 aaPredicted RBP8.21□□□□□ -1.1
HDLBP-242ENST00000488013 HIST1H1AQ02539 215 aaPredicted RBP8.21□□□□□ -1.1
HDLBP-242ENST00000488013 TNP2Q05952 138 aa8.21□□□□□ -1.1
HDLBP-242ENST00000488013 ACTL10Q5JWF8 245 aa8.21□□□□□ -1.1
HDLBP-242ENST00000488013 STHQ8IWL8 128 aa8.21□□□□□ -1.1
HDLBP-242ENST00000488013 FAM24BQ8N5W8 94 aa8.21□□□□□ -1.1
HDLBP-242ENST00000488013 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.1
HDLBP-242ENST00000488013 C9JCJ5 164 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 H3BMM0 161 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 HLA-DMBP28068 263 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 RPL35P42766 123 aaKnown RBP8.2□□□□□ -1.1
HDLBP-242ENST00000488013 GNG4P50150 75 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 GNG5P63218 68 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 KPRPQ5T749 579 aaPredicted RBP8.2□□□□□ -1.1
HDLBP-242ENST00000488013 C19orf73Q9NVV2 129 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 PSG8Q9UQ74 426 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 LY96Q9Y6Y9 160 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 TRRAPQ9Y4A5 3859 aa8.2□□□□□ -1.1
HDLBP-242ENST00000488013 IGKV2-40A0A087WW87 121 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-242ENST00000488013 TMEM218A2RU14 115 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 ZNF727A8MUV8 499 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 KRBOX1C9JBD0 128 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 LTAP01374 205 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 IGKV2D-40P01614 121 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-242ENST00000488013 CD7P09564 240 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 SFTA3P0C7M3 94 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 CT45A10P0DMU9 189 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 LEPP41159 167 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 MORN3Q6PF18 240 aaPredicted RBP8.19□□□□□ -1.1
HDLBP-242ENST00000488013 BAGE2Q86Y30 109 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 SMIM7Q9BQ49 75 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 NIPSNAP3BQ9BS92 247 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 C1QTNF4Q9BXJ3 329 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 AGPAT4-IT1Q9H0P7 198 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 PARLQ9H300 379 aa8.19□□□□□ -1.1
HDLBP-242ENST00000488013 A8MTW9 85 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 A8MZ25 164 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 PRAC2D3DTV9 90 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 G3V4G9 280 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 CEBPGP53567 150 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 SRSF3P84103 164 aaKnown RBP8.18□□□□□ -1.1
HDLBP-242ENST00000488013 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
HDLBP-242ENST00000488013 TMEM241Q24JQ0 296 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 ZNF674Q2M3X9 581 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 COX8CQ7Z4L0 72 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 PRNTQ86SH4 94 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 APRG1Q8IVJ8 170 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 TMEM183AQ8IXX5 376 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 OR4B1Q8NGF8 309 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 VGLL1Q99990 258 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 SEC11CQ9BY50 192 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 TUBA4BQ9H853 241 aa8.18□□□□□ -1.1
HDLBP-242ENST00000488013 KIR2DL5BA0A0G2JN68 375 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 KIR2DL5BA0A0G2JPC4 375 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 F6UB75 175 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 IGLV2-11P01706 119 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 CRISP2P16562 243 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 CDKN1BP46527 198 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 APOC4P55056 127 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 SMUG1Q53HV7 270 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 CENPWQ5EE01 88 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 Q86TA4 180 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
HDLBP-242ENST00000488013 KIR2DL5AQ8N109 375 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 Q8N1Y9 231 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 CITED4Q96RK1 184 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 PRR25Q96S07 402 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 VWFP04275 2813 aa8.17□□□□□ -1.1
HDLBP-242ENST00000488013 LOC102724200A0A096LPH7 203 aaPredicted RBP8.16□□□□□ -1.1
HDLBP-242ENST00000488013 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 TRAV34A0A0B4J273 112 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 C9JQL5 133 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 F8W036 122 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 UBE2CO00762 179 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 ERCC8Q13216 396 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 LINC00479Q96M42 142 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 ASCL2Q99929 193 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 C20orf144Q9BQM9 153 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 SRD5A3Q9H8P0 318 aa8.16□□□□□ -1.1
HDLBP-242ENST00000488013 MGAM2Q2M2H8 2515 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 GPX1P07203 203 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 GDF5OSQ5U4N7 250 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 DEFB125Q8N687 156 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 IGF2BP2-AS1Q96M15 143 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 DERL1Q9BUN8 251 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 MLST8Q9BVC4 326 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 CSTL1Q9H114 145 aa8.15□□□□□ -1.1
HDLBP-242ENST00000488013 TRAV21A0A0B4J279 112 aa8.14□□□□□ -1.11
HDLBP-242ENST00000488013 KLLNB2CW77 178 aa8.14□□□□□ -1.11
HDLBP-242ENST00000488013 ZNF705DP0CH99 300 aaPredicted RBP8.14□□□□□ -1.11
HDLBP-242ENST00000488013 ZNF705BP0CI00 300 aaPredicted RBP8.14□□□□□ -1.11
HDLBP-242ENST00000488013 FAM162BQ5T6X4 162 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms