RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 C9orf47Q6ZRZ4 202 aa12.66□□□□□ -0.38
PCCB-217ENST00000484181 LCNL1Q6ZST4 164 aa12.66□□□□□ -0.38
PCCB-217ENST00000484181 TMEM256Q8N2U0 113 aa12.66□□□□□ -0.38
PCCB-217ENST00000484181 KCNS1Q96KK3 526 aa12.66□□□□□ -0.38
PCCB-217ENST00000484181 FOXC2Q99958 501 aa12.66□□□□□ -0.38
PCCB-217ENST00000484181 RHPN1-AS1Q9BWJ2 59 aa12.66□□□□□ -0.38
PCCB-217ENST00000484181 SMAD7O15105 426 aaKnown RBP12.65□□□□□ -0.38
PCCB-217ENST00000484181 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
PCCB-217ENST00000484181 Q8N2B8 174 aa12.65□□□□□ -0.38
PCCB-217ENST00000484181 SIGLECL1Q8N7X8 197 aa12.65□□□□□ -0.38
PCCB-217ENST00000484181 OR10J6PQ8NGY7 276 aa12.65□□□□□ -0.38
PCCB-217ENST00000484181 UBE2E2Q96LR5 201 aa12.65□□□□□ -0.38
PCCB-217ENST00000484181 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
PCCB-217ENST00000484181 FBN2P35556 2912 aa12.65□□□□□ -0.38
PCCB-217ENST00000484181 GZMBP10144 247 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
PCCB-217ENST00000484181 KLF5Q13887 457 aaPredicted RBP12.64□□□□□ -0.39
PCCB-217ENST00000484181 RNF152Q8N8N0 203 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 MYOZ3Q8TDC0 251 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 ID1P41134 155 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 ERCC8Q13216 396 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 GDF5OSQ5U4N7 250 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 IL17RELQ6ZVW7 336 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
PCCB-217ENST00000484181 PRAC2D3DTV9 90 aa12.63□□□□□ -0.39
PCCB-217ENST00000484181 RPLP1P05386 114 aaKnown RBP12.63□□□□□ -0.39
PCCB-217ENST00000484181 IQCJQ1A5X6 159 aa12.63□□□□□ -0.39
PCCB-217ENST00000484181 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
PCCB-217ENST00000484181 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
PCCB-217ENST00000484181 SSBP4Q9BWG4 385 aaPredicted RBP12.63□□□□□ -0.39
PCCB-217ENST00000484181 TP53TG3Q9ULZ0 132 aa12.63□□□□□ -0.39
PCCB-217ENST00000484181 A0A1B0GUS0 222 aa12.62□□□□□ -0.39
PCCB-217ENST00000484181 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
PCCB-217ENST00000484181 TM4SF20Q53R12 229 aa12.62□□□□□ -0.39
PCCB-217ENST00000484181 Q71RC1 249 aaPredicted RBP12.62□□□□□ -0.39
PCCB-217ENST00000484181 FER1L6-AS1Q8NA97 138 aa12.62□□□□□ -0.39
PCCB-217ENST00000484181 C18orf32Q8TCD1 76 aa12.62□□□□□ -0.39
PCCB-217ENST00000484181 ALKBH7Q9BT30 221 aaPredicted RBP12.62□□□□□ -0.39
PCCB-217ENST00000484181 AGPAT4-IT1Q9H0P7 198 aa12.62□□□□□ -0.39
PCCB-217ENST00000484181 UTP20O75691 2785 aaKnown RBP12.62□□□□□ -0.39
PCCB-217ENST00000484181 NAV2Q8IVL1 2488 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 LGALS9O00182 355 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 SOCS3O14543 225 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 ORM1P02763 201 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 ARMS2P0C7Q2 107 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 CTRLP40313 264 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 DMRTA1Q5VZB9 504 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 LOC102724200A0A096LPH7 203 aaPredicted RBP12.61□□□□□ -0.39
PCCB-217ENST00000484181 M0QZ24 198 aa12.61□□□□□ -0.39
PCCB-217ENST00000484181 PRB4P10163 310 aaPredicted RBP12.61□□□□□ -0.39
PCCB-217ENST00000484181 USP9YO00507 2555 aaPredicted RBP12.6□□□□□ -0.39
PCCB-217ENST00000484181 TMSB15BA0A087X1C1 80 aa12.6□□□□□ -0.39
PCCB-217ENST00000484181 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
PCCB-217ENST00000484181 F2Z2F3 143 aa12.6□□□□□ -0.39
PCCB-217ENST00000484181 CD5LO43866 347 aa12.6□□□□□ -0.39
PCCB-217ENST00000484181 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
PCCB-217ENST00000484181 ZNF324O75467 553 aaPredicted RBP12.59□□□□□ -0.39
PCCB-217ENST00000484181 AMTP48728 403 aa12.59□□□□□ -0.39
PCCB-217ENST00000484181 ZNF80P51504 273 aaPredicted RBP12.59□□□□□ -0.39
PCCB-217ENST00000484181 LINC00310P59036 64 aa12.59□□□□□ -0.39
PCCB-217ENST00000484181 ZNF493Q6ZR52 646 aa12.59□□□□□ -0.39
PCCB-217ENST00000484181 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
PCCB-217ENST00000484181 NUPR1O60356 82 aa12.58□□□□□ -0.4
PCCB-217ENST00000484181 HSBP1O75506 76 aa12.58□□□□□ -0.4
PCCB-217ENST00000484181 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
PCCB-217ENST00000484181 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
PCCB-217ENST00000484181 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
PCCB-217ENST00000484181 GSN-AS1Q9NRJ2 163 aa12.58□□□□□ -0.4
PCCB-217ENST00000484181 GPX1P07203 203 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 IGLC6P0CF74 106 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 TMEM213A2RRL7 107 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 SCGB1D1O95968 90 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 PMCHP20382 165 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 KLHDC1Q8N7A1 406 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 CHCHD1Q96BP2 118 aaKnown RBP12.57□□□□□ -0.4
PCCB-217ENST00000484181 C20orf173Q96LM9 149 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 RCHY1Q96PM5 261 aa12.57□□□□□ -0.4
PCCB-217ENST00000484181 RAB4AP20338 218 aa12.56□□□□□ -0.4
PCCB-217ENST00000484181 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
PCCB-217ENST00000484181 RNASEKQ6P5S7 137 aaKnown RBP12.56□□□□□ -0.4
PCCB-217ENST00000484181 OR8A1Q8NGG7 326 aa12.56□□□□□ -0.4
PCCB-217ENST00000484181 KMT2BQ9UMN6 2715 aaPredicted RBP12.56□□□□□ -0.4
PCCB-217ENST00000484181 IGHV4OR15-8A0A075B7B6 117 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 A0A087WW49 117 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
PCCB-217ENST00000484181 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 YAE1D1Q9NRH1 226 aa12.55□□□□□ -0.4
PCCB-217ENST00000484181 SYNJ2BPP57105 145 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 TWIST1Q15672 202 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 PEMTQ9UBM1 199 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 NAGKQ9UJ70 344 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 CREBBPQ92793 2442 aa12.54□□□□□ -0.4
PCCB-217ENST00000484181 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms