RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 A0A0D9SG52 128 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 TEX13DA0A0J9YY54 714 aaPredicted RBP4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 A4D1N5 150 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 KLLNB2CW77 178 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 MBPP02686 304 aaPredicted RBP4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 SULT1A3P0DMM9 295 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 SULT1A4P0DMN0 295 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 CXCL2P19875 107 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 PLP1P60201 277 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 TMEM268Q5VZI3 342 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 ACOT7LQ6ZUV0 252 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 CCDC71LQ8N9Z2 235 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 RASL10AQ92737 203 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 SLC50A1Q9BRV3 221 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 RPH3ALQ9UNE2 315 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 HIGD1AQ9Y241 93 aa4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
SPTLC1-205ENST00000477888 CRYM-AS1A6NIL9 109 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 PRSS46E5RG02 174 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 PANO1I0J062 215 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 MPDU1O75352 247 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 HYPMO75409 117 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 HOXB5P09067 269 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 SNRPCP09234 159 aaKnown RBP4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 BTN1A1Q13410 526 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 LCN15Q6UWW0 184 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 PATE2Q6UY27 113 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 Q6ZQT7 251 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 OR10P1Q8NGE3 313 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 OR13C8Q8NGS7 320 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 ATP6V0E2Q8NHE4 81 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 TERB2Q8NHR7 220 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 ZFAND1Q8TCF1 268 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 FAM19A4Q96LR4 140 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 BLOC1S6Q9UL45 172 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 SSR3Q9UNL2 185 aa4.67□□□□□ -1.66
SPTLC1-205ENST00000477888 SLC17A3O00476 420 aa4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 PFN1P07737 140 aaKnown RBP4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 ANXA7P20073 488 aaKnown RBP4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 RNASE4P34096 147 aaKnown RBP4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 UBE2NLQ5JXB2 153 aa4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 DAZ4Q86SG3 579 aaKnown RBP4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 NHLRC2Q8NBF2 726 aa4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 RTBDNQ9BSG5 229 aaPredicted RBP4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 DAZ3Q9NR90 486 aaKnown RBP4.66□□□□□ -1.66
SPTLC1-205ENST00000477888 IGHV1OR15-1A0A075B7D0 117 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 TRAV8-1A0A0A6YYK1 113 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 GAGE12HA6NDE8 117 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 H3BTX0 84 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 PRYO14603 147 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 IL5P05113 134 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 OR5G3P0C626 314 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 CRISP2P16562 243 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 CCR6P51684 374 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 RAB11AP62491 216 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 FFAR4Q5NUL3 377 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 SAMD12Q8N8I0 201 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 MARCH1Q8TCQ1 289 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 DNAJC30Q96LL9 226 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 NAA60Q9H7X0 242 aa4.65□□□□□ -1.67
SPTLC1-205ENST00000477888 TRAV4A0A0B4J268 109 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 CD3DP04234 171 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 NMBP08949 121 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 NPSP0C0P6 89 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 OR4E1P0C645 316 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 LINC00869P0C866 280 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 IGLC2P0DOY2 106 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 GATA1P15976 413 aaPredicted RBP4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 ERCC8Q13216 396 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 SMCO1Q147U7 214 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 OPCMLQ14982 345 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 RNASE10Q5GAN6 216 aaKnown RBP4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 PRR9Q5T870 116 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 SDIM1Q6ZPB5 146 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 CYP2G1PQ6ZSU1 146 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 OR4D10Q8NGI6 311 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 SPXQ9BT56 116 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 AGPAT4-IT1Q9H0P7 198 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 PXMP4Q9Y6I8 212 aa4.64□□□□□ -1.67
SPTLC1-205ENST00000477888 IGKV2D-24A0A075B6R9 120 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 GGTLC3B5MD39 225 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 H3BQ15 152 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 PITX3O75364 302 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 TNFAIP8O95379 198 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 GPX1P07203 203 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 AKR1C1Q04828 323 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 CIRBPQ14011 172 aaKnown RBP4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 FAM122CQ6P4D5 195 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 WDR73Q6P4I2 378 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 LYZL2Q7Z4W2 148 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 S100A7AQ86SG5 101 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 SNX29P2Q8IUI4 249 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 ZFAND2AQ8N6M9 145 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 SLC25A29Q8N8R3 303 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 C9orf163Q8N9P6 203 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 OR4C5Q8NGB2 326 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 RMI2Q96E14 147 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 LINC00477Q96M19 166 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 GTSF1LQ9H1H1 148 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms