RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 LOC107986453A0A1B0GWG9 222 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 MIR22HGQ0VDD5 57 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 SPATA45Q537H7 98 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 AKAP14Q86UN6 197 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 TAC4Q86UU9 113 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 DIRC1Q969H9 104 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 CCDC115Q96NT0 180 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 AP1S3Q96PC3 154 aa0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 BOKQ9UMX3 212 aaPredicted RBP0.75□□□□□ -2.29
GPCPD1-204ENST00000473797 UNC13CQ8NB66 2214 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 FRMPD1Q5SYB0 1578 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 A2MP01023 1474 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 FANCMQ8IYD8 2048 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 BCL9O00512 1426 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 MYH1P12882 1939 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 LOC107984156A0A0G2JMH3 177 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 TRBV27A0A0K0K1C4 114 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 LOC107984640A0A0U1RRK4 108 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 BBIP1A8MTZ0 92 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 SULT1C4O75897 302 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 SAA1P0DJI8 122 aaPredicted RBP0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 RPL7P18124 248 aaKnown RBP0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 CRYGSP22914 178 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 NEDD8Q15843 81 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 KRTAP26-1Q6PEX3 210 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 GLIPR1L1Q6UWM5 242 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 FOXI2Q6ZQN5 318 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 ARL17AQ8IVW1 177 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 BRK1Q8WUW1 75 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 CLEC2BQ92478 149 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 AIF1LQ9BQI0 150 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 NIT2Q9NQR4 276 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 SPANXA1Q9NS26 97 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 GINS2Q9Y248 185 aa0.74□□□□□ -2.29
GPCPD1-204ENST00000473797 XIRP1Q702N8 1843 aaKnown RBP0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 RFX7Q2KHR2 1363 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 TRBV7-6A0A0J9YX20 115 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 PRORSD1PA6NEY8 169 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 J3KT08 172 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 M0QZK8 103 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 IGLV3-1P01715 115 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 PSPHP78330 225 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 LINC00299Q6ZSB3 139 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 C3orf62Q6ZUJ4 267 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 OR8I2Q8N0Y5 310 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 TMEM229BQ8NBD8 167 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 OR10AC1Q8NH08 325 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 PYDC1Q8WXC3 89 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 CIB3Q96Q77 187 aaPredicted RBP0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 TAF9BQ9HBM6 251 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 CBLN4Q9NTU7 201 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 FKBP11Q9NYL4 201 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 CALML5Q9NZT1 146 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 ANK1P16157 1881 aa0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 TCOF1Q13428 1488 aaKnown RBP0.73□□□□□ -2.29
GPCPD1-204ENST00000473797 ROS1P08922 2347 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 ANKRD30AQ9BXX3 1397 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 DPM2O94777 84 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 IGHV3-33P01772 117 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 RPS3P23396 243 aaKnown RBP eCLIP0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 CMPK1P30085 196 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 ETV6P41212 452 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 EFNA4P52798 201 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 ZCCHC23Q6ZST2 131 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 LINC00269Q8N2A0 174 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 C5orf17Q8NAS9 161 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 MORN4Q8NDC4 146 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 OR51A4Q8NGJ6 313 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 CCL4L1Q8NHW4 92 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 ANP32BQ92688 251 aaKnown RBP0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 SMIM7Q9BQ49 75 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 SPANXCQ9NY87 97 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 LAMA4Q16363 1823 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 ERBINQ96RT1 1412 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 USP54Q70EL1 1684 aa0.72□□□□□ -2.29
GPCPD1-204ENST00000473797 ZGRF1Q86YA3 2104 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 TRPM7Q96QT4 1865 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 PHRF1Q9P1Y6 1649 aaKnown RBP0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 VIRMAQ69YN4 1812 aaKnown RBP0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 KIAA1549LQ6ZVL6 1849 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 DEGS1O15121 323 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 EDF1O60869 148 aaKnown RBP0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 PAEPP09466 180 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 NBEAP1P0C6P0 100 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 CKS2P33552 79 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 RPL22P35268 128 aaKnown RBP0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 FOXA3P55318 350 aaPredicted RBP0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 DNAJB13P59910 316 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 BLCAPP62952 87 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 OCIAD2Q56VL3 154 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 OR5A2Q8NGI9 324 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 NABP2Q9BQ15 211 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 C19orf12Q9NSK7 152 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 NINQ8N4C6 2090 aa0.71□□□□□ -2.3
GPCPD1-204ENST00000473797 TRAV36DV7A0A075B6V5 113 aa0.7□□□□□ -2.3
GPCPD1-204ENST00000473797 A0A1W2PPB8 328 aa0.7□□□□□ -2.3
GPCPD1-204ENST00000473797 A0A1W2PPM0 123 aa0.7□□□□□ -2.3
GPCPD1-204ENST00000473797 A0A1W2PRS3 328 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms