RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	RNASE8	Q8TDE3	154 aa	Known RBP	6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	GNPNAT1	Q96EK6	184 aa	Predicted RBP	6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	C16orf92	Q96LL3	132 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	GPR82	Q96P67	336 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	TRGV9	Q99603	122 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	PSMG3	Q9BT73	122 aa	Predicted RBP	6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	TMEM208	Q9BTX3	173 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	SLC25A22	Q9H936	323 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	RPRM	Q9NS64	109 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	ZNF586	Q9NXT0	402 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	MDFIC	Q9P1T7	246 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	RNF24	Q9Y225	148 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	TIMM9	Q9Y5J7	89 aa		6.61	□□□□□ -1.35
MCF2L-223	ENST00000473345	TRAV26-1	A0A087WT03	109 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	INS	P01308	110 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	SULT1A2	P50226	295 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	LINC00315	P59091	139 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	SERF2	P84101	59 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345		Q5VSD8	79 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	EIF5AL1	Q6IS14	154 aa	Known RBP	6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	OR2G3	Q8NGZ4	309 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	TMED6	Q8WW62	240 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	SLC35E1	Q96K37	410 aa		6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	NOP10	Q9NPE3	64 aa	Known RBP	6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	PAIP2B	Q9ULR5	123 aa	Known RBP	6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	DMBT1	Q9UGM3	2413 aa	Predicted RBP	6.6	□□□□□ -1.35
MCF2L-223	ENST00000473345	UBE2L5P	A0A1B0GUS4	154 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	SMR3B	P02814	79 aa	Predicted RBP	6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	DNAH10OS	P0CZ25	163 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	HTN1	P15515	57 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	GALR1	P47211	349 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	CLLU1	Q5K131	121 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	TEPP	Q6URK8	271 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	HSD17B11	Q8NBQ5	300 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	LRRC20	Q8TCA0	184 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	SCGB1C1	Q8TD33	95 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	UPK3B	Q9BT76	320 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	NPCDR1	Q9BY65	106 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	SH3BGRL3	Q9H299	93 aa		6.59	□□□□□ -1.35
MCF2L-223	ENST00000473345	FLG2	Q5D862	2391 aa	Predicted RBP	6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	UMAD1	C9J7I0	102 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345		H3BRN7	92 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	MRPS12	O15235	138 aa	Known RBP	6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	NMB	P08949	121 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	SNRPC	P09234	159 aa	Known RBP	6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	FGF7	P21781	194 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	RPL29	P47914	159 aa	Known RBP	6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	RAB5C	P51148	216 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	OR5I1	Q13606	314 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	LYPD6B	Q8NI32	183 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	RXFP4	Q8TDU9	374 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	SAT2	Q96F10	170 aa	Predicted RBP	6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	VSIG2	Q96IQ7	327 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	LINC01587	Q99440	93 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	MGST2	Q99735	147 aa		6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345	MRPS16	Q9Y3D3	137 aa	Known RBP	6.58	□□□□□ -1.36
MCF2L-223	ENST00000473345		A0A096LPF7	62 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	PRAC2	D3DTV9	90 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	AGPAT2	O15120	278 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	DUSP14	O95147	198 aa	Known RBP	6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	LINC00869	P0C866	280 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	ORM2	P19652	201 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	TAS2R60	P59551	318 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	HIST1H1A	Q02539	215 aa	Predicted RBP	6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	FAM74A1	Q5RGS3	127 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	DPPA3	Q6W0C5	159 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	OR8A1	Q8NGG7	326 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	OR1B1	Q8NGR6	318 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	TMPRSS5	Q9H3S3	457 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	MED9	Q9NWA0	146 aa		6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	6.57	□□□□□ -1.36
MCF2L-223	ENST00000473345	GAGE12B	A1L429	117 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	LINC00862	A6NCI5	91 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	C17orf112	F2Z3M2	114 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	GAGE7	O76087	117 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	GAGE12F	P0CL80	117 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	GAGE12G	P0CL81	117 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	GAGE12I	P0CL82	117 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	M6PR	P20645	277 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	CAMLG	P49069	296 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	SELENOT	P62341	195 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	AKR1C1	Q04828	323 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	PATE2	Q6UY27	113 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	TMEM256	Q8N2U0	113 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	ZNF738	Q8NE65	137 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	BPIFC	Q8NFQ6	507 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	SHANK2-AS3	Q9BTD1	123 aa		6.56	□□□□□ -1.36
MCF2L-223	ENST00000473345	SMCO3	A2RU48	225 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	MB	P02144	154 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	PLP1	P60201	277 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	BLOC1S1	P78537	153 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	RAB31	Q13636	194 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	GFI1B	Q5VTD9	330 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	MORN5	Q5VZ52	161 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	CYP2G1P	Q6ZSU1	146 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345		Q6ZTI0	123 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	TMEM263	Q8WUH6	116 aa	Known RBP	6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	MBD3L1	Q8WWY6	194 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	C16orf74	Q96GX8	76 aa		6.55	□□□□□ -1.36
MCF2L-223	ENST00000473345	KCNIP2	Q9NS61	270 aa		6.55	□□□□□ -1.36

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