RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 ZNF503Q96F45 646 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 AQP10Q96PS8 301 aa11.13□□□□□ -0.63
HDAC6-218ENST00000470942 NOP10Q9NPE3 64 aaKnown RBP11.13□□□□□ -0.63
HDAC6-218ENST00000470942 TIMM8BQ9Y5J9 83 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-218ENST00000470942 CSN1S1P47710 185 aa11.12□□□□□ -0.63
HDAC6-218ENST00000470942 RAB2AP61019 212 aa11.12□□□□□ -0.63
HDAC6-218ENST00000470942 ZNF266Q14584 549 aa11.12□□□□□ -0.63
HDAC6-218ENST00000470942 C9orf47Q6ZRZ4 202 aa11.12□□□□□ -0.63
HDAC6-218ENST00000470942 VGLL1Q99990 258 aa11.12□□□□□ -0.63
HDAC6-218ENST00000470942 Q9H3A6 140 aa11.12□□□□□ -0.63
HDAC6-218ENST00000470942 FXYD6-FXYD2A0A087WZ82 144 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 C7orf71A4D174 169 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 GPX1P07203 203 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 P0DMU3 169 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 FAM231AP0DMU4 169 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 FAM231CP0DMU5 169 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
HDAC6-218ENST00000470942 LYPD1Q8N2G4 141 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 INO80EQ8NBZ0 244 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-218ENST00000470942 OR10G4Q8NGN3 311 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 OR10G9Q8NGN4 311 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 OR10G7Q8NGN6 311 aa11.11□□□□□ -0.63
HDAC6-218ENST00000470942 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
HDAC6-218ENST00000470942 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 F5H768 121 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 ATP5G1P05496 136 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 ATP5G3P48201 142 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 CD300CQ08708 224 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 BTN1A1Q13410 526 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 ZNF492Q9P255 531 aa11.1□□□□□ -0.63
HDAC6-218ENST00000470942 EPPK1P58107 5090 aaKnown RBP11.1□□□□□ -0.63
HDAC6-218ENST00000470942 CBY3A6NI87 242 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 KLLNB2CW77 178 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
HDAC6-218ENST00000470942 CRISP2P16562 243 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 ATP6V0CP27449 155 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 ZNF138P52744 262 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 UBE2DNLQ8IWF7 75 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 OR2T35Q8NGX2 323 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 HYLS1Q96M11 299 aa11.09□□□□□ -0.63
HDAC6-218ENST00000470942 PGPA6NDG6 321 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 CDC34P49427 236 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-218ENST00000470942 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 OR2G3Q8NGZ4 309 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 Q8TAT8 98 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 RXFP4Q8TDU9 374 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 PSMG3Q9BT73 122 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-218ENST00000470942 OTORQ9NRC9 128 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 RPH3ALQ9UNE2 315 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 DNAH6Q9C0G6 4158 aa11.08□□□□□ -0.64
HDAC6-218ENST00000470942 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
HDAC6-218ENST00000470942 ZNF324O75467 553 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-218ENST00000470942 NMBP08949 121 aa11.07□□□□□ -0.64
HDAC6-218ENST00000470942 FAM74A1Q5RGS3 127 aa11.07□□□□□ -0.64
HDAC6-218ENST00000470942 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
HDAC6-218ENST00000470942 ZFAND2AQ8N6M9 145 aa11.07□□□□□ -0.64
HDAC6-218ENST00000470942 CMTM2Q8TAZ6 248 aa11.07□□□□□ -0.64
HDAC6-218ENST00000470942 TNFSF18Q9UNG2 199 aa11.07□□□□□ -0.64
HDAC6-218ENST00000470942 BORCS7-ASMTA0A0B4J1R7 106 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 RBAKDNA6NC62 111 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 RGS13O14921 159 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 GAGE7O76087 117 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 MBP02144 154 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 SERF2P84101 59 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 PRR9Q5T870 116 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 RPL7L1Q6DKI1 246 aaKnown RBP11.06□□□□□ -0.64
HDAC6-218ENST00000470942 C15orf53Q8NAA6 179 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 SH3BGRL3Q9H299 93 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 DNAH10Q8IVF4 4471 aa11.06□□□□□ -0.64
HDAC6-218ENST00000470942 RNF222A6NCQ9 220 aa11.05□□□□□ -0.64
HDAC6-218ENST00000470942 ARL14EPLP0DKL9 152 aa11.05□□□□□ -0.64
HDAC6-218ENST00000470942 ZNF680Q8NEM1 530 aa11.05□□□□□ -0.64
HDAC6-218ENST00000470942 RAB24Q969Q5 203 aa11.05□□□□□ -0.64
HDAC6-218ENST00000470942 GSN-AS1Q9NRJ2 163 aa11.05□□□□□ -0.64
HDAC6-218ENST00000470942 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 TRBV7-9A0A0J9YWB2 115 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 NUDT3O95989 172 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 STAG3L2P0CL84 134 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 OR5I1Q13606 314 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 Q6ZQT7 251 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 GNPNAT1Q96EK6 184 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-218ENST00000470942 LINC00467Q9BRT7 94 aa11.04□□□□□ -0.64
HDAC6-218ENST00000470942 ACTR3CQ9C0K3 210 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-218ENST00000470942 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
HDAC6-218ENST00000470942 Q6ZTI0 123 aa11.03□□□□□ -0.64
HDAC6-218ENST00000470942 GOLT1AQ6ZVE7 132 aa11.03□□□□□ -0.64
HDAC6-218ENST00000470942 LINC00612Q8N6U2 182 aa11.03□□□□□ -0.64
HDAC6-218ENST00000470942 ARPC5LQ9BPX5 153 aa11.03□□□□□ -0.64
HDAC6-218ENST00000470942 G3V3Q6 166 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms