RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 STAG3L2P0CL84 134 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 STAG3L3P0CL85 134 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 ZNF345Q14585 488 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 TMEM78Q5T7P6 136 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
COL5A1-206ENST00000465877 LINC01587Q99440 93 aa9.22□□□□□ -0.93
COL5A1-206ENST00000465877 H7BYZ3 331 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 TAAR5O14804 337 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 CSN1S1P47710 185 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 TAS2R60P59551 318 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 Q8TAT8 98 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 C16orf74Q96GX8 76 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 FAM19A4Q96LR4 140 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 VGLL1Q99990 258 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 NIPSNAP3BQ9BS92 247 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 AGPAT4-IT1Q9H0P7 198 aa9.21□□□□□ -0.94
COL5A1-206ENST00000465877 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 TRAV12-3A0A0B4J271 114 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 C7orf71A4D174 169 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 KLLNB2CW77 178 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
COL5A1-206ENST00000465877 HTN1P15515 57 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 CRISP2P16562 243 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 AZU1P20160 251 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 BTN1A1Q13410 526 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 SSX7Q7RTT5 188 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
COL5A1-206ENST00000465877 TMEM263Q8WUH6 116 aaKnown RBP9.2□□□□□ -0.94
COL5A1-206ENST00000465877 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 OTORQ9NRC9 128 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 CYTL1Q9NRR1 136 aa9.2□□□□□ -0.94
COL5A1-206ENST00000465877 RBAKDNA6NC62 111 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 LYRM9A8MSI8 78 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 IGLL5B9A064 214 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 DIRC3C9JPN6 131 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 FAM74A1Q5RGS3 127 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 PRR9Q5T870 116 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 KCNRGQ8N5I3 272 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 OR11H4Q8NGC9 324 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 HYLS1Q96M11 299 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 ARPC5LQ9BPX5 153 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 ACTR3CQ9C0K3 210 aaPredicted RBP9.19□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
COL5A1-206ENST00000465877 IGHV4-4A0A075B6R2 117 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 HMSDA8MTL9 139 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 LY6G6CO95867 125 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 GCHFRP30047 84 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF138P52744 262 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 TCTAP57738 103 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 DAD1P61803 113 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF726P1Q15940 193 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 CMTM2Q8TAZ6 248 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 PYGO2Q9BRQ0 406 aa9.18□□□□□ -0.94
COL5A1-206ENST00000465877 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 CTXND1A0A1B0GTU2 59 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 CXorf1O96002 111 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 GPX1P07203 203 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 CD300CQ08708 224 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 AKR1C8PQ5T2L2 129 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF493Q6ZR52 646 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 IQCF2Q8IXL9 164 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 SUN5Q8TC36 379 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 TMEM167BQ9NRX6 74 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
COL5A1-206ENST00000465877 KANTRA0A1W2PQU2 76 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 PGPA6NDG6 321 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 BCL2L11O43521 198 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 NMBP08949 121 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 GNG5P63218 68 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 GOLT1AQ6ZVE7 132 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 APLNQ9ULZ1 77 aa9.16□□□□□ -0.94
COL5A1-206ENST00000465877 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 A0A0D9SG52 128 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 SNURFLB1AK76 121 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 GGTLC3B5MD39 225 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF324O75467 553 aaPredicted RBP9.15□□□□□ -0.94
COL5A1-206ENST00000465877 HTN3P15516 51 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 RNASE4P34096 147 aaKnown RBP9.15□□□□□ -0.94
COL5A1-206ENST00000465877 LGALS9CQ6DKI2 356 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 C5orf17Q8NAS9 161 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 ZNF471Q9BX82 626 aaPredicted RBP9.15□□□□□ -0.94
COL5A1-206ENST00000465877 TIMM8BQ9Y5J9 83 aaPredicted RBP9.15□□□□□ -0.94
COL5A1-206ENST00000465877 LENEPQ9Y5L5 61 aa9.15□□□□□ -0.94
COL5A1-206ENST00000465877 TRAV8-1A0A0A6YYK1 113 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 MAP1LC3B2A6NCE7 125 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 DEFB130BP0DP73 79 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 DEFB130AP0DP74 79 aa9.14□□□□□ -0.95
COL5A1-206ENST00000465877 FGF8P55075 233 aaPredicted RBP9.14□□□□□ -0.95
COL5A1-206ENST00000465877 Q6ZNX1 250 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms