RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TSSC4Q9Y5U2 329 aaPredicted RBP5.67□□□□□ -1.5
USP48-206ENST00000464577 ARFGEF3Q5TH69 2177 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 A0A087WX48 190 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 TIMM23O14925 209 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 IGHG4P01861 327 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 ORM1P02763 201 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 PRB4P10163 310 aaPredicted RBP5.67□□□□□ -1.5
USP48-206ENST00000464577 C12orf74Q32Q52 190 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 IL17RELQ6ZVW7 336 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 PIP4P1Q86T03 277 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 TTC9CQ8N5M4 171 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 GTSF1LQ9H1H1 148 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 C21orf62Q9NYP8 219 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 MSRB1Q9NZV6 116 aa5.67□□□□□ -1.5
USP48-206ENST00000464577 PLXNB1O43157 2135 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 A0A1B0GV72 72 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 GAS8-AS1O95177 125 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 PLNP26678 52 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 DLX1P56177 255 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 WFDC2Q14508 124 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 RRN3P1Q2M238 152 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 ZNF672Q499Z4 452 aaPredicted RBP5.66□□□□□ -1.5
USP48-206ENST00000464577 CFHR4Q92496 578 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 SMAD5-AS1Q9Y6J3 95 aa5.66□□□□□ -1.5
USP48-206ENST00000464577 PLCE1Q9P212 2302 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 TRBV7-3A0A075B6L6 115 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 TRAV12-1A0A0B4J245 112 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 A0A0G2JNJ9 132 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 LAGE3Q14657 143 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 DTX2Q86UW9 622 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 MAPKAPK5-AS1Q8N8E1 139 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 MYOZ3Q8TDC0 251 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 ATP6V0BQ99437 205 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 MRPL35Q9NZE8 188 aaKnown RBP5.65□□□□□ -1.5
USP48-206ENST00000464577 Q9UFV3 132 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 PRO0461Q9UI25 63 aa5.65□□□□□ -1.5
USP48-206ENST00000464577 URB1O60287 2271 aaKnown RBP5.65□□□□□ -1.51
USP48-206ENST00000464577 TRAV40A0A0B4J280 105 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 TMEM238LA0A1B0GVL6 79 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 NCBP2LA6PVI3 153 aaKnown RBP5.65□□□□□ -1.51
USP48-206ENST00000464577 E7EQL1 145 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 RAB9AP51151 201 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 PRB3Q04118 309 aaPredicted RBP5.65□□□□□ -1.51
USP48-206ENST00000464577 SMAGPQ0VAQ4 97 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 C5orf64Q2M2E5 130 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 TCTEX1D4Q5JR98 221 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 NRACQ8N912 160 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 LY6G5BQ8NDX9 201 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 OR11H6Q8NGC7 330 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 SPAG8Q99932 426 aaPredicted RBP5.65□□□□□ -1.51
USP48-206ENST00000464577 TMEM160Q9NX00 188 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 DPM3Q9P2X0 92 aa5.65□□□□□ -1.51
USP48-206ENST00000464577 NBEAQ8NFP9 2946 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 MALRD1Q5VYJ5 2156 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 IGHV4-4A0A075B6R2 117 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 B9A039 149 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 GATA1P15976 413 aaPredicted RBP5.64□□□□□ -1.51
USP48-206ENST00000464577 GAGE13Q4V321 117 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 DYNAPQ8N1N2 210 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 ATP6V0E2Q8NHE4 81 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 S4R3C0 116 aa5.64□□□□□ -1.51
USP48-206ENST00000464577 H3BMG7 143 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 CTSGP08311 255 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 HLA-DMBP28068 263 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 CCDC144NLQ6NUI1 221 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 MRPL53Q96EL3 112 aaKnown RBP5.63□□□□□ -1.51
USP48-206ENST00000464577 HIST1H4GQ99525 98 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 SLC50A1Q9BRV3 221 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 MSRB2Q9Y3D2 182 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 IGKV3D-20A0A0C4DH25 116 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 ODF3BA8MYP8 253 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 F8VRH5 84 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 H7C1H1 209 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 PRRG2O14669 202 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 GOSR1O95249 250 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 SLC25A16P16260 332 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 ETDBQ3ZM63 59 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 MRAP2Q96G30 205 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 ONECUT1Q9UBC0 465 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 VPS13AQ96RL7 3174 aa5.63□□□□□ -1.51
USP48-206ENST00000464577 ZDBF2Q9HCK1 2354 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 IGHV7-4-1A0A0J9YVY3 117 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 OR11H12B2RN74 326 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 PRAC2D3DTV9 90 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.62□□□□□ -1.51
USP48-206ENST00000464577 TRGV3P03979 118 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 NDPQ00604 133 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 ERCC8Q13216 396 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 KLK9Q2XQG4 91 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 IGFL4Q6B9Z1 124 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 SH2D6Q7Z4S9 175 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 DEFB124Q8NES8 71 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 OR11H1Q8NG94 326 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 OR11H2Q8NH07 326 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 HIF1ANQ9NWT6 349 aa5.62□□□□□ -1.51
USP48-206ENST00000464577 KLK9Q9UKQ9 250 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms