RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 CD28P10747 220 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 HBBP68871 147 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 C15orf32Q32M92 178 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 TCTEX1D4Q5JR98 221 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 KHDC1LQ5JSQ8 128 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 RCHY1Q96PM5 261 aa13.9□□□□□ -0.18
ATPAF2-202ENST00000462733 A0A1B0GV90 55 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 BRI3O95415 125 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 IGHV3-23P01764 117 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 SNRPCP09234 159 aaKnown RBP13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 BPIFA4PQ86YQ2 179 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 OR4F17Q8NGA8 305 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 TMEM158Q8WZ71 300 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 DAZAP1Q96EP5 407 aaKnown RBP13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 MIEN1Q9BRT3 115 aa13.89□□□□□ -0.19
ATPAF2-202ENST00000462733 M0R143 59 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 IGHV3-11P01762 117 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 ATP5G2Q06055 141 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 KLK9Q2XQG4 91 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 GDF5OSQ5U4N7 250 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 ALKBH7Q9BT30 221 aaPredicted RBP13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 KLK9Q9UKQ9 250 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 RPH3ALQ9UNE2 315 aa13.88□□□□□ -0.19
ATPAF2-202ENST00000462733 TRBV19A0A075B6N1 114 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 FAM223BA6NKX1 122 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 DIRC3C9JPN6 131 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 C16orf54Q6UWD8 224 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 RBPMS2Q6ZRY4 209 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 FAM223AQ8IWN6 122 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 RNF152Q8N8N0 203 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 Q8N976 141 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 TMEM75Q8N9X5 138 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 VN1R17PQ8TDU5 208 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 WI2-2373I1.2A0A1W2PRP0 233 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 K7EQM0 130 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 IGLC2P0DOY2 106 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 RAB4AP20338 218 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 PMCHP20382 165 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 KRTDAPP60985 99 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 DMRTA1Q5VZB9 504 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 WFDC12Q8WWY7 111 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 USMG5Q96IX5 58 aa13.87□□□□□ -0.19
ATPAF2-202ENST00000462733 A0A0G2JLM5 398 aa13.86□□□□□ -0.19
ATPAF2-202ENST00000462733 NIT1Q86X76 327 aa13.86□□□□□ -0.19
ATPAF2-202ENST00000462733 ZNF491Q8N8L2 437 aa13.86□□□□□ -0.19
ATPAF2-202ENST00000462733 RNF125Q96EQ8 232 aa13.86□□□□□ -0.19
ATPAF2-202ENST00000462733 CITED2Q99967 270 aaPredicted RBP13.86□□□□□ -0.19
ATPAF2-202ENST00000462733 ZFP30Q9Y2G7 519 aa13.86□□□□□ -0.19
ATPAF2-202ENST00000462733 EREGO14944 169 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 SCGB2A1O75556 95 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 IGLV2-11P01706 119 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 PDE6HQ13956 83 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 MYOZ3Q8TDC0 251 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 EEF1AKMT3Q96AZ1 226 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 BORCS7Q96B45 105 aa13.85□□□□□ -0.19
ATPAF2-202ENST00000462733 CD33P20138 364 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 C18orf65Q6ZTR6 163 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 ARL6IP6Q8N6S5 226 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 SNHG12Q9BXW3 62 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 C21orf62Q9NYP8 219 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 TENM1Q9UKZ4 2725 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 SERTM2A0A1B0GWG4 89 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 A0A1W2PRX2 142 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 MFAP4P55083 255 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 LINC00322Q6ZN03 302 aaPredicted RBP13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 GOLT1AQ6ZVE7 132 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 GTSF1Q8WW33 167 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 COL6A5A8TX70 2615 aa13.84□□□□□ -0.19
ATPAF2-202ENST00000462733 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 HSBP1O75506 76 aa13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 FOXA3P55318 350 aaPredicted RBP13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 Q56UQ5 140 aa13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 TCF24Q7RTU0 167 aa13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 ZNF502Q8TBZ5 544 aa13.83□□□□□ -0.2
ATPAF2-202ENST00000462733 A0A1B0GW15 77 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 H3BTX0 84 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 GNG7O60262 68 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 C3orf79P0CE67 100 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 S100A7P31151 101 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 CAMPP49913 170 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 NUTF2P61970 127 aaKnown RBP13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 PMCHL1Q16048 86 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 KLHL30-AS1Q8NEE0 82 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 SGK494Q96LW2 274 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 CCDC140Q96MF4 163 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 PAM16Q9Y3D7 125 aa13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 TSSC4Q9Y5U2 329 aaPredicted RBP13.82□□□□□ -0.2
ATPAF2-202ENST00000462733 TRBV7-1A0A0A6YYK4 115 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 OR2T8A6NH00 312 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 IL4P05112 153 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 GPR183P32249 361 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 CTRLP40313 264 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 Q6AWC8 147 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 EXOC3-AS1Q8N2X6 119 aa13.81□□□□□ -0.2
ATPAF2-202ENST00000462733 CHCHD1Q96BP2 118 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms