RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TMEM78Q5T7P6 136 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 C9orf47Q6ZRZ4 202 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 C5orf17Q8NAS9 161 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 U3KQK5 164 aa8.59□□□□□ -1.03
CPNE1-221ENST00000462352 TRAV12-2A0A075B6T6 113 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 TEX46H3BTG2 121 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-221ENST00000462352 PAGE4O60829 102 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 HBE1P02100 147 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 TCRAP04437 139 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 CDKN1BP46527 198 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 CCL20P78556 96 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 RARRES2Q99969 163 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 NKX6-2Q9C056 277 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-221ENST00000462352 EPDR1Q9UM22 224 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 ARL2-SNX15V9GYD0 113 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
CPNE1-221ENST00000462352 INSP01308 110 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 IFNA7P01567 189 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 TSPOP30536 169 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 LEPP41159 167 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 ATP5G3P48201 142 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 PPT1P50897 306 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 ZNF138P52744 262 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 BLOC1S1P78537 153 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 KIR3DS1Q14943 382 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 CST9LP1Q5W188 147 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 CCDC28AQ8IWP9 274 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 OR11H2Q8NH07 326 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 Q8TAT8 98 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 FAM19A4Q96LR4 140 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 IGF2BP2-AS1Q96M15 143 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 ZNF492Q9P255 531 aa8.57□□□□□ -1.04
CPNE1-221ENST00000462352 SERTM2A0A1B0GWG4 89 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 ZNF705AQ6ZN79 300 aaPredicted RBP8.56□□□□□ -1.04
CPNE1-221ENST00000462352 C1orf158Q8N1D5 194 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 CYB561D1Q8N8Q1 229 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 ATG101Q9BSB4 218 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 GNG13Q9P2W3 67 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 X6R8D5 127 aa8.56□□□□□ -1.04
CPNE1-221ENST00000462352 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 TRAV8-1A0A0A6YYK1 113 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 J3KRW8 73 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 K7EQM0 130 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 PEX7O00628 323 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 RBMY1A1P0DJD3 496 aaKnown RBP8.55□□□□□ -1.04
CPNE1-221ENST00000462352 RBMY1CP0DJD4 496 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 CRISP2P16562 243 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 RBMY1FQ15415 496 aaKnown RBP8.55□□□□□ -1.04
CPNE1-221ENST00000462352 GFI1BQ5VTD9 330 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 HIST1H2BAQ96A08 127 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 SGK494Q96LW2 274 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 TCEAL7Q9BRU2 100 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 MANBALQ9NQG1 85 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 GOLT1BQ9Y3E0 138 aa8.55□□□□□ -1.04
CPNE1-221ENST00000462352 TRBV7-9A0A0J9YWB2 115 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 KLLNB2CW77 178 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 C11orf94C9JXX5 98 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 NMBP08949 121 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 PMS2P11Q13670 270 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 TMEM75Q8N9X5 138 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 ZNF680Q8NEM1 530 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 LYPD6BQ8NI32 183 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 LINC00479Q96M42 142 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 TMEM208Q9BTX3 173 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
CPNE1-221ENST00000462352 F6UZH7 168 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 IFNA1P01562 189 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 GPX1P07203 203 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 MIFP14174 115 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 FLI1Q01543 452 aaPredicted RBP8.53□□□□□ -1.04
CPNE1-221ENST00000462352 BTN1A1Q13410 526 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 PRR9Q5T870 116 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 NEU1Q99519 415 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 C20orf144Q9BQM9 153 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 PSG8Q9UQ74 426 aa8.53□□□□□ -1.04
CPNE1-221ENST00000462352 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 IGHV4-28A0A0C4DH34 117 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 C7orf71A4D174 169 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 FBLL1A6NHQ2 334 aaKnown RBP8.52□□□□□ -1.05
CPNE1-221ENST00000462352 BCL2P10415 239 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 RNASE4P34096 147 aaKnown RBP8.52□□□□□ -1.05
CPNE1-221ENST00000462352 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 TMEM256Q8N2U0 113 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 Q8NAQ8 132 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 TVP23CQ96ET8 276 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 LINC01587Q99440 93 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 TXNDC17Q9BRA2 123 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
CPNE1-221ENST00000462352 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
CPNE1-221ENST00000462352 SMIM9A6NGZ8 99 aa8.51□□□□□ -1.05
CPNE1-221ENST00000462352 H7BYZ3 331 aa8.51□□□□□ -1.05
CPNE1-221ENST00000462352 DEFB4AO15263 64 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms