RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CCSO14618 274 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 EREGO14944 169 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 MPDU1O75352 247 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 IL7P13232 177 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 SULT1A1P50225 295 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 LINC00315P59091 139 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 SLAQ13239 276 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 IBA57Q5T440 356 aaKnown RBP14.8□□□□□ -0.04
CPNE1-220ENST00000458038 FAM19A4Q96LR4 140 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 C2orf50Q96LR7 162 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 TIMM9Q9Y5J7 89 aa14.8□□□□□ -0.04
CPNE1-220ENST00000458038 FAM24AA6NFZ4 105 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 M0R3E3 92 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 CRISP2P16562 243 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 TCL1AP56279 114 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 BAXQ07812 192 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 ATP6V1FQ16864 119 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 C9orf47Q6ZRZ4 202 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 STX12Q86Y82 276 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 C11orf1Q9H5F2 150 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 AAMDCQ9H7C9 122 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 LYRM2Q9NU23 88 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-220ENST00000458038 PTTG2Q9NZH5 202 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 ICOSQ9Y6W8 199 aa14.79□□□□□ -0.04
CPNE1-220ENST00000458038 PAX4O43316 350 aa14.78□□□□□ -0.04
CPNE1-220ENST00000458038 SPINK4O60575 86 aa14.78□□□□□ -0.04
CPNE1-220ENST00000458038 GPX1P07203 203 aa14.78□□□□□ -0.04
CPNE1-220ENST00000458038 RNASE4P34096 147 aaKnown RBP14.78□□□□□ -0.04
CPNE1-220ENST00000458038 ERCC8Q13216 396 aa14.78□□□□□ -0.04
CPNE1-220ENST00000458038 ST6GAL2Q96JF0 529 aa14.78□□□□□ -0.04
CPNE1-220ENST00000458038 AGPAT4-IT1Q9H0P7 198 aa14.78□□□□□ -0.04
CPNE1-220ENST00000458038 APOBP04114 4563 aaKnown RBP14.78□□□□□ -0.04
CPNE1-220ENST00000458038 NDUFB4O95168 129 aa14.77□□□□□ -0.05
CPNE1-220ENST00000458038 TCRBP04435 133 aa14.77□□□□□ -0.05
CPNE1-220ENST00000458038 CD300CQ08708 224 aa14.77□□□□□ -0.05
CPNE1-220ENST00000458038 Q6ZRN7 208 aaPredicted RBP14.77□□□□□ -0.05
CPNE1-220ENST00000458038 PRO0255Q9UI72 69 aa14.77□□□□□ -0.05
CPNE1-220ENST00000458038 DNAH5Q8TE73 4624 aa14.77□□□□□ -0.05
CPNE1-220ENST00000458038 UBE2L5PA0A1B0GUS4 154 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 LYRM1O43325 122 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 BTN1A1Q13410 526 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 TMEM78Q5T7P6 136 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 CDPF1Q6NVV7 123 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 NFE4Q86UQ8 179 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 TMEM252Q8N6L7 170 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 KLF12Q9Y4X4 402 aa14.76□□□□□ -0.05
CPNE1-220ENST00000458038 RGS13O14921 159 aa14.75□□□□□ -0.05
CPNE1-220ENST00000458038 PLA2G10O15496 165 aa14.75□□□□□ -0.05
CPNE1-220ENST00000458038 NXPH4O95158 308 aa14.75□□□□□ -0.05
CPNE1-220ENST00000458038 FGF7P21781 194 aa14.75□□□□□ -0.05
CPNE1-220ENST00000458038 TRAV9-2A0A087WT02 112 aa14.74□□□□□ -0.05
CPNE1-220ENST00000458038 TRBV7-9A0A0J9YWB2 115 aa14.74□□□□□ -0.05
CPNE1-220ENST00000458038 K7EP13 123 aa14.74□□□□□ -0.05
CPNE1-220ENST00000458038 ERVFC1-1P60608 527 aa14.74□□□□□ -0.05
CPNE1-220ENST00000458038 MRPL23Q16540 153 aaKnown RBP14.74□□□□□ -0.05
CPNE1-220ENST00000458038 BLNKQ8WV28 456 aa14.74□□□□□ -0.05
CPNE1-220ENST00000458038 VGLL1Q99990 258 aa14.74□□□□□ -0.05
CPNE1-220ENST00000458038 IGHV1OR15-1A0A075B7D0 117 aa14.73□□□□□ -0.05
CPNE1-220ENST00000458038 S100A10P60903 97 aa14.73□□□□□ -0.05
CPNE1-220ENST00000458038 IL15RAQ13261 267 aa14.73□□□□□ -0.05
CPNE1-220ENST00000458038 ARPC5LQ9BPX5 153 aa14.73□□□□□ -0.05
CPNE1-220ENST00000458038 HHLA3Q9XRX5 114 aa14.73□□□□□ -0.05
CPNE1-220ENST00000458038 TRAV6A0A075B6T7 132 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 IGSF23A1L1A6 192 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 EPM2AB3EWF7 344 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 PYYP10082 97 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 ICAM4Q14773 271 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 EXOC3-AS1Q8N2X6 119 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 ZFAND2AQ8N6M9 145 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 SEC22CQ9BRL7 303 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 NPCDR1Q9BY65 106 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 GPN1Q9HCN4 374 aaPredicted RBP14.72□□□□□ -0.05
CPNE1-220ENST00000458038 NUDT15Q9NV35 164 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 ZNF492Q9P255 531 aa14.72□□□□□ -0.05
CPNE1-220ENST00000458038 NBEAP1P0C6P0 100 aa14.71□□□□□ -0.05
CPNE1-220ENST00000458038 CRYBA4P53673 196 aa14.71□□□□□ -0.05
CPNE1-220ENST00000458038 RAB32Q13637 225 aa14.71□□□□□ -0.05
CPNE1-220ENST00000458038 NEGR1Q7Z3B1 354 aa14.71□□□□□ -0.05
CPNE1-220ENST00000458038 ZNF415Q09FC8 603 aa14.7□□□□□ -0.06
CPNE1-220ENST00000458038 LYPD5Q6UWN5 251 aa14.7□□□□□ -0.06
CPNE1-220ENST00000458038 DMBT1Q9UGM3 2413 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-220ENST00000458038 IGKV2-40A0A087WW87 121 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-220ENST00000458038 IGKV2D-40P01614 121 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-220ENST00000458038 H2AFB2P0C5Z0 115 aa14.69□□□□□ -0.06
CPNE1-220ENST00000458038 ZNF138P52744 262 aa14.69□□□□□ -0.06
CPNE1-220ENST00000458038 FAM122CQ6P4D5 195 aa14.69□□□□□ -0.06
CPNE1-220ENST00000458038 SLC25A2Q9BXI2 301 aa14.69□□□□□ -0.06
CPNE1-220ENST00000458038 MRPL32Q9BYC8 188 aaKnown RBP14.69□□□□□ -0.06
CPNE1-220ENST00000458038 KCNIP2Q9NS61 270 aa14.69□□□□□ -0.06
CPNE1-220ENST00000458038 TP53TG3Q9ULZ0 132 aa14.69□□□□□ -0.06
CPNE1-220ENST00000458038 IGHV3-53P01767 116 aa14.68□□□□□ -0.06
CPNE1-220ENST00000458038 FHL2Q14192 279 aa14.68□□□□□ -0.06
CPNE1-220ENST00000458038 IQCF2Q8IXL9 164 aa14.68□□□□□ -0.06
CPNE1-220ENST00000458038 FAM167A-AS1Q96KT0 104 aa14.68□□□□□ -0.06
CPNE1-220ENST00000458038 OR51M1Q9H341 326 aa14.68□□□□□ -0.06
CPNE1-220ENST00000458038 MRPL16Q9NX20 251 aaKnown RBP14.68□□□□□ -0.06
CPNE1-220ENST00000458038 LY96Q9Y6Y9 160 aa14.68□□□□□ -0.06
CPNE1-220ENST00000458038 RBAKDNA6NC62 111 aa14.67□□□□□ -0.06
CPNE1-220ENST00000458038 PRAF2O60831 178 aa14.67□□□□□ -0.06
CPNE1-220ENST00000458038 GCSAMLQ5JQS6 135 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms