RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 AGPAT4-IT1Q9H0P7 198 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 PTTG2Q9NZH5 202 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
PDGFB-204ENST00000455790 TRAV26-1A0A087WT03 109 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 A0A0J9YY99 117 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 C7orf71A4D174 169 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 KLLNB2CW77 178 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 INMT-MINDY4F8WBC2 141 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 RLN2P04090 185 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 OR10J4P0C629 311 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 OR5I1Q13606 314 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 ICAM4Q14773 271 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 FAM122CQ6P4D5 195 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 Q6ZQT7 251 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 PHYHIPLQ96FC7 376 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 VGLL1Q99990 258 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 PYGO2Q9BRQ0 406 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 WDR61Q9GZS3 305 aaKnown RBP8.31□□□□□ -1.08
PDGFB-204ENST00000455790 SLC25A31Q9H0C2 315 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 TMPRSS5Q9H3S3 457 aa8.31□□□□□ -1.08
PDGFB-204ENST00000455790 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 PRAF2O60831 178 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
PDGFB-204ENST00000455790 SLC25A5P05141 298 aaKnown RBP8.3□□□□□ -1.08
PDGFB-204ENST00000455790 M6PRP20645 277 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
PDGFB-204ENST00000455790 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 PPP1R1CQ8WVI7 109 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 FXYD5Q96DB9 178 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 ZNF503Q96F45 646 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 MARVELD1Q9BSK0 173 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 GSN-AS1Q9NRJ2 163 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 PRELID1Q9Y255 219 aa8.3□□□□□ -1.08
PDGFB-204ENST00000455790 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDGFB-204ENST00000455790 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 CRISP2P16562 243 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 CCL18P55774 89 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 TNP2Q05952 138 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
PDGFB-204ENST00000455790 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 C9orf47Q6ZRZ4 202 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 SSX7Q7RTT5 188 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 Q8TAT8 98 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 RXFP4Q8TDU9 374 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 GNPNAT1Q96EK6 184 aaPredicted RBP8.29□□□□□ -1.08
PDGFB-204ENST00000455790 ATP5SQ99766 215 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 OR51M1Q9H341 326 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 AAMDCQ9H7C9 122 aa8.29□□□□□ -1.08
PDGFB-204ENST00000455790 RYR1P21817 5038 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 PAXXQ9BUH6 204 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 MRPL32Q9BYC8 188 aaKnown RBP8.28□□□□□ -1.08
PDGFB-204ENST00000455790 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 FUT9Q9Y231 359 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 HSPB11Q9Y547 144 aa8.28□□□□□ -1.08
PDGFB-204ENST00000455790 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 SSNA1O43805 119 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 OR7C2O60412 319 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 MPC2O95563 127 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 MED14OSP0DP75 135 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 CYCSP99999 105 aaKnown RBP8.27□□□□□ -1.09
PDGFB-204ENST00000455790 FFAR4Q5NUL3 377 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 TMEM78Q5T7P6 136 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 EIF4E3Q8N5X7 224 aaKnown RBP8.27□□□□□ -1.09
PDGFB-204ENST00000455790 ZNF680Q8NEM1 530 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 LINC00467Q9BRT7 94 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 KCNIP2Q9NS61 270 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 MBD2Q9UBB5 411 aa8.27□□□□□ -1.09
PDGFB-204ENST00000455790 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 GPX1P07203 203 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 TCL1AP56279 114 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 UBE2L3P68036 154 aaKnown RBP8.26□□□□□ -1.09
PDGFB-204ENST00000455790 ESRGQ1W209 222 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 WFDC1Q9HC57 220 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 ZNF492Q9P255 531 aa8.26□□□□□ -1.09
PDGFB-204ENST00000455790 HSPG2P98160 4391 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 C17orf112F2Z3M2 114 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 SPINK4O60575 86 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 NMBP08949 121 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
PDGFB-204ENST00000455790 ZNF138P52744 262 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 RANP62826 216 aaKnown RBP8.25□□□□□ -1.09
PDGFB-204ENST00000455790 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 Q9H3A6 140 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 Q9H8V8 135 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 MRPL16Q9NX20 251 aaKnown RBP8.25□□□□□ -1.09
PDGFB-204ENST00000455790 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
PDGFB-204ENST00000455790 IGHV1OR15-1A0A075B7D0 117 aa8.24□□□□□ -1.09
PDGFB-204ENST00000455790 A0A096LPF7 62 aa8.24□□□□□ -1.09
PDGFB-204ENST00000455790 H3BNG1 76 aa8.24□□□□□ -1.09
PDGFB-204ENST00000455790 RGS13O14921 159 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms