RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF117Q03924 483 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 S100A7L2Q5SY68 101 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 ABCA7Q8IZY2 2146 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.8□□□□□ -1.8
EPHA3-202ENST00000452448 CHCHD1Q96BP2 118 aaKnown RBP3.8□□□□□ -1.8
EPHA3-202ENST00000452448 DEFB127Q9H1M4 99 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 PCDH15Q96QU1 1955 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 ANAPC1Q9H1A4 1944 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 PCSK5Q92824 1860 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 IGHV3OR15-7A0A075B7D8 119 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 IL9P15248 144 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 SPINK2P20155 84 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 CA6P23280 308 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 ZFP2Q6ZN57 461 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 MKXQ8IYA7 352 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 CCL26Q9Y258 94 aa3.8□□□□□ -1.8
EPHA3-202ENST00000452448 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 A0A1W2PQD3 144 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 C19orf71A6NCJ1 209 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 A8MUN3 132 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 M0R381 172 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 NDUFB3O43676 98 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 SPINK4O60575 86 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 NPYP01303 97 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 UBE2D3P61077 147 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 UBE2D2P62837 147 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 HBBP68871 147 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 MRPS36P82909 103 aaKnown RBP3.79□□□□□ -1.8
EPHA3-202ENST00000452448 FHL2Q14192 279 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 RNASE6Q93091 150 aaKnown RBP3.79□□□□□ -1.8
EPHA3-202ENST00000452448 COL4A3Q01955 1670 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 ARHGAP21Q5T5U3 1957 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 C2orf16Q68DN1 1984 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 IGHV1OR15-9A0A0B4J2B8 117 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 IGKV1-8A0A0C4DH67 115 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 C2CD4DB7Z1M9 353 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 H3BMM0 161 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 NDUFS5O43920 106 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 TMEM170BQ5T4T1 132 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 C5orf38Q86SI9 138 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 UBE2WQ96B02 151 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 LYZL4Q96KX0 146 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 PROK2Q9HC23 129 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 IL36RNQ9UBH0 155 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 MYO9BQ13459 2157 aa3.79□□□□□ -1.8
EPHA3-202ENST00000452448 TCF20Q9UGU0 1960 aaKnown RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 IGLV1-36A0A0B4J1U3 117 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF503-AS2A6NEH8 195 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 LST1O00453 97 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 UBE2L6O14933 153 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 PI3P19957 117 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 Q6P435 159 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 Q8N2B8 174 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 PFN4Q8NHR9 129 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 URB1-AS1Q96HZ7 61 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 SLC25A15Q9Y619 301 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 GON4LQ3T8J9 2241 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 DOCK11Q5JSL3 2073 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 IGKV1D-8A0A087WSZ0 117 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 TRBV27A0A0K0K1C4 114 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 CRYM-AS1A6NIL9 109 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 RBMY1A1P0DJD3 496 aaKnown RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 NPPCP23582 126 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 ZNF80P51504 273 aaPredicted RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 DYNLT3P51808 116 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 RPL18Q07020 188 aaKnown RBP3.78□□□□□ -1.8
EPHA3-202ENST00000452448 IGFL3Q6UXB1 125 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 LINC00643Q86TS7 51 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 MYO7AQ13402 2215 aa3.78□□□□□ -1.8
EPHA3-202ENST00000452448 SCN3AQ9NY46 2000 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 NCOA6Q14686 2063 aaPredicted RBP3.77□□□□□ -1.81
EPHA3-202ENST00000452448 ARHGEF17Q96PE2 2063 aaPredicted RBP3.77□□□□□ -1.81
EPHA3-202ENST00000452448 TRBV20OR9-2A0A075B6H5 130 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 TRBV5-5A0A0J9YX44 114 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 TEX49A0A1B0GTD5 131 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 LOC101059948A0A1B0GTJ6 334 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 PPYP01298 95 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 LINC00205P59089 165 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 FAM104BQ5XKR9 115 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 VN1R4Q7Z5H5 301 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 FAM223AQ8IWN6 122 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 TAF15Q92804 592 aaKnown RBP eCLIP3.77□□□□□ -1.81
EPHA3-202ENST00000452448 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 ESM1Q9NQ30 184 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 DEC1Q9P2X7 70 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 ZNF318Q5VUA4 2279 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 TRBV25-1A0A075B6N4 114 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 A0A1B0GWA3 101 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 C11orf94C9JXX5 98 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 LTAP01374 205 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 CCKP06307 115 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 PEBP1P30086 187 aaKnown RBP3.77□□□□□ -1.81
EPHA3-202ENST00000452448 GNB1P62873 340 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 SFTA2Q6UW10 78 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 GFRALQ6UXV0 394 aa3.77□□□□□ -1.81
EPHA3-202ENST00000452448 MDP1Q86V88 176 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms