RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ATP5LO75964 103 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 CISD3P0C7P0 127 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 EVI2AP22794 236 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MPV17P39210 176 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MAGEA5P43359 124 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MRPL23Q16540 153 aaKnown RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 KLF17Q5JT82 389 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 UTF1Q5T230 341 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPINK14Q6IE38 97 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MOB3BQ86TA1 216 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 PDPNQ86YL7 162 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 CACNG8Q8WXS5 425 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IFI27L1Q96BM0 104 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 NABP2Q9BQ15 211 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 RTL8AQ9BWD3 113 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 CHRNA10Q9GZZ6 450 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 MPC1Q9Y5U8 109 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 LINC00312Q9Y6C7 94 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 TANC2Q9HCD6 1990 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPAG17Q6Q759 2223 aa3.28□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-6A0A0C4DH72 117 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 A0A1B0GUT8 65 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGLL5B9A064 214 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGLV2-8P01709 118 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 ATP5G1P05496 136 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 DEFA4P12838 97 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PLNP26678 52 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 SUB1P53999 127 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 FOXA3P55318 350 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 ATP5G2Q06055 141 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PLGLAQ15195 96 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 CFAP126Q5VTH2 177 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PVRIGQ6DKI7 326 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q6ZR54 194 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 RPS19BP1Q86WX3 136 aaKnown RBP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 KIR3DL3Q8N743 410 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC37A2Q8TED4 501 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 BADQ92934 168 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 RPEQ96AT9 228 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRELID3AQ96N28 172 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 HIST1H4GQ99525 98 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 CITED1Q99966 193 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 NAA38Q9BRA0 125 aaKnown RBP3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR2H1Q9GZK4 316 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 TP73-AS1Q9UF72 201 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRNDQ9UKY0 176 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 PTPRBP23467 1997 aa3.27□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV25A0A0B4J276 109 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 SNAI2O43623 268 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 DPM2O94777 84 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MOSP00540 346 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGKCP01834 107 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MT-ATP8P03928 68 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGF1P05019 195 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC25A5P05141 298 aaKnown RBP3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF32P17041 273 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 FXYD2P54710 66 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 PPP1R27Q86WC6 154 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 LRRC75A-AS1Q8N1F1 130 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q8N7P7 452 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR11H6Q8NGC7 330 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 MRAPQ8TCY5 172 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 DNAJC30Q96LL9 226 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 RASL11BQ9BPW5 248 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 PAXXQ9BUH6 204 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM133Q9H2Q1 129 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 FBXL15Q9H469 300 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 B4GALT7Q9UBV7 327 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 VPREB3Q9UKI3 123 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 TET1Q8NFU7 2136 aa3.26□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRBV25-1A0A075B6N4 114 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 A0A1B0GX51 115 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 K7ERJ3 54 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 EFNA2O43921 213 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 LTAP01374 205 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 WFDC2Q14508 124 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM78Q5T7P6 136 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 C10orf113Q5VZT2 155 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 SPATA31B1PQ5VZV4 182 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 MORN3Q6PF18 240 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q86TA4 180 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC00612Q8N6U2 182 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 RNF138Q8WVD3 245 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 NRGNQ92686 78 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 PGLYRP4Q96LB8 373 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF488Q96MN9 340 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 C20orf78Q9BR46 151 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 NXT2Q9NPJ8 142 aaKnown RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRO0461Q9UI25 63 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms