RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CT45A5P0DMU8 189 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 CT45A7P0DMV0 189 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BOP23527 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 GCHFRP30047 84 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BBP33778 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF138P52744 262 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 NDUFA6P56556 154 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BDP58876 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 UBE2G2P60604 165 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BCP62807 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 CCL8P80075 99 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 LCN2P80188 198 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST2H2BEQ16778 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 VMA21Q3ZAQ7 101 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 SPRNQ5BIV9 151 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 NCMAPQ5T1S8 102 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 Q5W150 140 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 MIC13Q5XKP0 118 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 NTM-AS1Q6ZSK4 140 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TCF23Q7RTU1 214 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 SLC16A13Q7RTY0 426 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TMEM144Q7Z5S9 345 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 LINC00311Q8N616 119 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 C8orf31Q8N9H6 132 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 NECAP1Q8NC96 275 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 OR4C13Q8NGP0 309 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 OR10J6PQ8NGY7 276 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 OR2T10Q8NGZ9 312 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 TNFRSF14Q92956 283 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BHQ93079 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 LEAP2Q969E1 77 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 FLYWCH2Q96CP2 140 aaKnown RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 ACY3Q96HD9 319 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 IMMP2LQ96T52 175 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 PFDN5Q99471 154 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BNQ99877 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 HIST1H2BMQ99879 126 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 MRPL32Q9BYC8 188 aaKnown RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 MRPL20Q9BYC9 149 aaKnown RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 OR51M1Q9H341 326 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 NIT2Q9NQR4 276 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 PITPNC1Q9UKF7 332 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 FUT9Q9Y231 359 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF835Q9Y2P0 537 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 WASHC3Q9Y3C0 194 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 AMMECR1Q9Y4X0 333 aaPredicted RBP2.56□□□□□ -2
HMGB3P6-201ENST00000444896 DYSFO75923 2080 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 DSCAML1Q8TD84 2053 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 ACACAQ13085 2346 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 GVINP1Q7Z2Y8 2422 aa2.56□□□□□ -2
HMGB3P6-201ENST00000444896 PRRC2CQ9Y520 2896 aaKnown RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 CELSR3Q9NYQ7 3312 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 IGHV1-69-2A0A0G2JMI3 117 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 TEX50A0A1B0GTY4 177 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 XKRY2A2RUG3 117 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 DPRXA6NFQ7 191 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 C9JCJ5 164 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 H0YJW9 148 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 K7EM74 188 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 COX7A2P2O60397 106 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 OR7C2O60412 319 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 DSCAMO60469 2012 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 GGCTO75223 188 aaKnown RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 IGKV1-16P04430 117 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 TYMSP04818 313 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 PFN1P07737 140 aaKnown RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 OR5G3P0C626 314 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 RNASE2P10153 161 aaKnown RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 CCL3L1P16619 93 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 OR10J1P30954 320 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 GPX4P36969 197 aaPredicted RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 ATP5G3P48201 142 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 GNG4P50150 75 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 ZNF137PP52743 207 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 PRRX1P54821 245 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 HLA-DRB5Q30154 266 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 TMEM155Q4W5P6 130 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 C5orf47Q569G3 176 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 GCSAMLQ5JQS6 135 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 ACTL10Q5JWF8 245 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 DNLZQ5SXM8 178 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 FAM78BQ5VT40 261 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 CEMP1Q6PRD7 247 aaPredicted RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 MUC6Q6W4X9 2439 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 ASPMQ8IZT6 3477 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 HIST3H2BBQ8N257 126 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 OR5T1Q8NG75 326 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 OR4P4Q8NGL7 312 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 TMEM167AQ8TBQ9 72 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 RNASEH2CQ8TDP1 164 aaKnown RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 CACNG8Q8WXS5 425 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 CCL17Q92583 94 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 FRZBQ92765 325 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 RNASE6Q93091 150 aaKnown RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 SFRP2Q96HF1 295 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
HMGB3P6-201ENST00000444896 NABP2Q9BQ15 211 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 NDUFA4L2Q9NRX3 87 aa2.55□□□□□ -2
HMGB3P6-201ENST00000444896 KAAG1Q9UBP8 84 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms